Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1311 |
Symbol | |
ID | 5193231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1479048 |
End bp | 1480334 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585778 |
Product | major facilitator transporter |
Protein accession | YP_001266655 |
Protein GI | 148546553 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00188583 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCA CCGGCGTGCA ACAGCAGGTC AGTTCCCTCC GTTCGTCCGG GCCTTTCGCC TGGTACCGCG ACATCGACAA ACAGCAACGA CGTACCTTCT GGAGCTGCAA GATTGGCTAT GGCCTGGACG GCATGGACAC ACAGATGCTC AGTTTCGTCA TTCCTACACT GATCATGCTG TGGGGTATCA CCACCACCGA AGCCGGGTTG ATCCACACCA GCACGCTGAT CGCCTCGGCT GTAGGAGGCT GGGTGGCCGG TATCCTCTCC GACCGCATCG GCCGGGTGCG TACCCTGCAA CTGACGGTGT TGTGGTTCGC CTTCTTCACC TTCCTGTGCG GCTTCGCTCA GAACTACGAG CAACTGTTGA TTGCCCGAAC CCTCATGGGC TTTGGCTTCG GTGGCGAGTG GACCGCCGGC GCGGTGTTGA TCGGCGAGGT GATCCGCGCC CAGGACCGCG GCAAGGCGGT GGGCATGGTG CAGTCCGGTT GGGCAATTGG CTGGGGCCTC ACGGCCATCC TTTATGCGCT GCTGTTCTCG TGGCTGCCGG CAGAGCAGGC CTGGCGTGCG TTGTTCCTGC TGGGGCTGGT ACCGGCAATC TTCGTTATCT TCGTTCGCCG CCTGGTCAAG GACCCTGAGG TCTATCGTAA GGCCAAGGCA GTGGAAAACG CCGAGGCACC CTCGCGCTTC TACGAAATCT TCGCGCCGGG CATGCTCTGG ACCACCGTGC GGGCATCCCT GCTGACCACC GGCGCACTCG GCGGTTACTA CGCCATCACC TCGTGGCTGC CAACCTTCCT GAAGAACGAA CGCGGCCTGA GCGTGCTGGG CACGGGTGGT TATCTGGCCA TGGTGATCGT CGGCTCGTAC ATGGGCTATG TGGTCAGCGC TTATCTATCC GACCTGCTGG GGCGCAAGAA GAACTTCATC CTGTTCGCCG TGGGCTCTTT CGTCATTGTG CTGTTGTACA CGCAGATGCC GGTCAGCGAT GGCGTGATGC TGTGGCTGGG CCTCCCGTTG GGCTTCTTCG CCTCGGGTAT CTTCAGCGGC ATGGGGGCGT TTCTGACCGA ACTGTTCCCC ACGCGCATTC GGGGTTCGGG GCAGGGCTTC TGTTACAACA TCGGCAAGGT CATTGCCGCG CTGTTTCCGT TGATGATCGG CATGCTCGGC CAGAATGTTC CGCTGGGCCT GGGTATCGGC GTGTTTTCTG CGGTGTCCTA CGGCATTGTG ATCGTGGCGG CCTTGAGCTT GCCGGAAACC CGCGGCAAAC AGCTGCAGGC GCGGTAA
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Protein sequence | MNPTGVQQQV SSLRSSGPFA WYRDIDKQQR RTFWSCKIGY GLDGMDTQML SFVIPTLIML WGITTTEAGL IHTSTLIASA VGGWVAGILS DRIGRVRTLQ LTVLWFAFFT FLCGFAQNYE QLLIARTLMG FGFGGEWTAG AVLIGEVIRA QDRGKAVGMV QSGWAIGWGL TAILYALLFS WLPAEQAWRA LFLLGLVPAI FVIFVRRLVK DPEVYRKAKA VENAEAPSRF YEIFAPGMLW TTVRASLLTT GALGGYYAIT SWLPTFLKNE RGLSVLGTGG YLAMVIVGSY MGYVVSAYLS DLLGRKKNFI LFAVGSFVIV LLYTQMPVSD GVMLWLGLPL GFFASGIFSG MGAFLTELFP TRIRGSGQGF CYNIGKVIAA LFPLMIGMLG QNVPLGLGIG VFSAVSYGIV IVAALSLPET RGKQLQAR
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