Gene Pput_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1293 
Symbol 
ID5193796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1462864 
End bp1463358 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID640585761 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001266638 
Protein GI148546536 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATATT TTTCTGCACG GCCAGCGCGC GATATGGACA GTTTCGACCA GCACATTCTT 
ACCCTGCTAC AGCGTGATGC CTCAATCTCG CTGAAGGACC TGGCCGAGGC CGTCAACCTG
TCCACCACAC CGTGCTGGAA GCGGGTCAAG CGCCTGGAGG AAGACGGCTA CATCCTCGGC
CGCGTCGCCC TGCTGGACCC CGAACGGCTG GGGTTGGGGC TTACCGTGTT CGTCCAGCTC
AAGACCCAGC GCCACGACAG CGCATGGCTG GAGCAGTTTG CTGCGACGGT GACCGGGTTC
GAGGAAGTGA TGGAGTGCTA CCGCATGTCC GGGGACTGGG ACTACATGCT GCGGGTGGTG
GTGGGTGATA TTGCAGCGTA TGACCGGTTC TACAAAAAGC TGATTACCCG TACCGATGGC
CTATCGAACA TCACCTCCAG TTTTGCCATG GAGCAGATGA AGTACACCAC GGCTTACCCG
GTGCATCGCG CCTGA
 
Protein sequence
MKYFSARPAR DMDSFDQHIL TLLQRDASIS LKDLAEAVNL STTPCWKRVK RLEEDGYILG 
RVALLDPERL GLGLTVFVQL KTQRHDSAWL EQFAATVTGF EEVMECYRMS GDWDYMLRVV
VGDIAAYDRF YKKLITRTDG LSNITSSFAM EQMKYTTAYP VHRA