Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1290 |
Symbol | |
ID | 5194322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1458277 |
End bp | 1459176 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585758 |
Product | hypothetical protein |
Protein accession | YP_001266635 |
Protein GI | 148546533 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCC CCCCCTCCAC CGATGTATTG CGCGTGCTGT TCACCCTCAA GGGGTCGATC GTCAAACGCA TTGCCCTGCG CTGTCTGATG GTGACACTGC TGGCCGCGCT GATCGTGCTG GTCGAGCGGC ATTTCCCGAC GTATTTCTAC CCGGTCAGCG CCACGCCATT CACCTTGCTG GGCCTGTCGC TGTCGATCTT CATGAGCTTT CGCAACAACG CGTGCTACGA CCGTTGGTGG GAGGGGCGCA AGGCCTGGGG CAAACTGATT ATCGAAACCC GCTCGTTCGT GCGGGAAAGC GTGGCGATTA CCGACGAAAC ACTGCGCGCC GAACTGCTGC GCAACCTGTG TGGTTTCGCC CATGCACTCA ATGCCCGGCT GCGTAACGAG GACGAACGGG CAGCTGCCAG GCCGTGGCTG GCCAGGGCCG ATGCGATCAG CCCGCACAAT GTGTGCGACG GCATCCTGCG TGAAATCGGC GAACACTGTT CACGGTTGGC CGCACAGCAA CAGATCAGCG AATGGCGCTA CACCCTGCTG GAGCAGCGCC TGGTGGGCCT GACCGAAGTG CAGGCCACCT GTGAGCGGAT CAAGGGCACT CCCTTGCCGT TCCCCTACAC GCTGCTGCTG CACCGTACTA TCTACATTTT CTGCCTGCTG CTGCCGTTTG CCCTGGCCGA GCCGCTGGGC TGGCTGGCGC CGCTGTTCAC CACCATCGTG GGGTACACGT TCTTCGGGCT GGATGCGATC GGCAACGAGC TGGAAGACCC GTTCGGGCGT GATGAAAACG ACCTGCCGAC CGATGCCATG GTGCGGACTG TGGAGCGCGA TGTGCTGGCC GGGCTGGGGG AACGGCAGCT GCCTCCCGCC TTGTTGCCGG TGGGGTATGT GTTGAGCTGA
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Protein sequence | MIVPPSTDVL RVLFTLKGSI VKRIALRCLM VTLLAALIVL VERHFPTYFY PVSATPFTLL GLSLSIFMSF RNNACYDRWW EGRKAWGKLI IETRSFVRES VAITDETLRA ELLRNLCGFA HALNARLRNE DERAAARPWL ARADAISPHN VCDGILREIG EHCSRLAAQQ QISEWRYTLL EQRLVGLTEV QATCERIKGT PLPFPYTLLL HRTIYIFCLL LPFALAEPLG WLAPLFTTIV GYTFFGLDAI GNELEDPFGR DENDLPTDAM VRTVERDVLA GLGERQLPPA LLPVGYVLS
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