| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1262 |
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| Symbol | |
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| ID | 5191639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1429760 |
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| End bp | 1431196 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585729 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001266607 |
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| Protein GI | 148546505 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.349395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.85963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTAC TGCGCCCTAC CCTGCTGACG CTGGCCTGCC TGATGGCCCT TCCCGGCCAT
GCTGACGACC TGCCATCACT GGGTGATGCC AGTTCTGCGA TCGTCTCGCC GCAACAGGAG
CACCAACTGG GCCGTGCCTG GCTCAGCCTG CTGCGCGGCC AGGTCAATCA GCTCAACGAC
CCACAGCTCA AGGACTACGT CGAAACCAGC GTGTACAAGC TGGCCGAAAC CAGCCAGCTG
CAGGACCGGC GCCTGGAGTT CATCCTGATC GACAGCCGCG AGCTGAACGC CTTTGCCGCC
CCGGGTGGCA TTGTCGGGGT CAACGGCGGG CTGTTCCTCA ACGCCCAGAC CGAGGGTGAA
TATGCCTCGG TACTGGCCCA CGAACTGGCG CACTTGTCGC AACGCCACTT CGCGCGGGGT
GTCGAGGCCC AGCAGCGTAT GCAGTTGCCG ATGATGGCAG CGCTGCTGGC CGGCATCGTG
CTGGCCGCAG GTGGCGCCGG CGATGCGGGC ATCGGCATGA TTGCCGGCAC CCAGGCGGCG
GCCATTCAGG AGCAACGGCG CTTCTCGCGC CAGAATGAAC AGGAAGCTGA CCGCATCGGT
ATCCAGAACC TGGAAAAGGC CGGCTACGAT CCGCGCAACA TGCCGACCAT GTTCGAGCGC
CTGGCACGCC AGTATCGCTA TGACGCAAAA CCGCCGGAGT TCCTGCTGAC CCACCCGGTG
ACCGAATCAC GTATTGCCGA CACCCGTAAC CGCGCCGACC AGGCGCCCCA GGGTGGTATT
GAAGACAGCA TGCGCTACCA GCTGATCCGC GCCCGGGTGG CACTGACCTA CGAAGGCACG
CCGGGGCTTG CCGCCAAGCG CTTCCGCGCC CAGCTGGACG AAGACCCAAA ACTGGATGCC
GCACGTTATG GCCTGGCCTT GGCACAGATC AAGGGCGGGC AATTGAACGA GGCCCGTGAA
ATGCTCAAGC CGCTGCTGGC CAAGGCGCCC AACGACATCA CCTACAACCT GGCGCAGATC
GACCTGGACA TCACCAACAA CCGTCTTGCC GACGCCCAGC AGCGCGCCGA ACGGATGCAG
GGGCTGTACC CGGGCAACTA CCCGTTGAAA CAGGTGCGTG CCGACCTGCT GGTGAAACAG
AACAAGCCGG CTGAGGCCGA GAAGGTGTTG AACGAGCTGG TGAAGAGTCG GCCGGATGAC
CCGGATGTGT GGTACGACAT GGCCGAGGTG CGTGGCTTGT CGGGCAATAC CATTGGCTTG
CACCGGGCGC GTGCCGAGTA CTTCACGCTG GTCGGCGACT TTGATCAGGC AATCCAGCAG
CTGGATTACG CCAAGCGTCG GGCGGGCGGT AACTTCCCGC TGGCCTCACA GATTGACCAG
CGCCAGCGCG AGATCATGGA GCAACGGCGC ATGGTTCAGG AAATGATGGG GCGCTGA
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| Protein sequence | MNLLRPTLLT LACLMALPGH ADDLPSLGDA SSAIVSPQQE HQLGRAWLSL LRGQVNQLND
PQLKDYVETS VYKLAETSQL QDRRLEFILI DSRELNAFAA PGGIVGVNGG LFLNAQTEGE
YASVLAHELA HLSQRHFARG VEAQQRMQLP MMAALLAGIV LAAGGAGDAG IGMIAGTQAA
AIQEQRRFSR QNEQEADRIG IQNLEKAGYD PRNMPTMFER LARQYRYDAK PPEFLLTHPV
TESRIADTRN RADQAPQGGI EDSMRYQLIR ARVALTYEGT PGLAAKRFRA QLDEDPKLDA
ARYGLALAQI KGGQLNEARE MLKPLLAKAP NDITYNLAQI DLDITNNRLA DAQQRAERMQ
GLYPGNYPLK QVRADLLVKQ NKPAEAEKVL NELVKSRPDD PDVWYDMAEV RGLSGNTIGL
HRARAEYFTL VGDFDQAIQQ LDYAKRRAGG NFPLASQIDQ RQREIMEQRR MVQEMMGR
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