| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1261 |
|---|
| Symbol | |
|---|
| ID | 5191638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1428552 |
|---|
| End bp | 1429502 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640585728 |
|---|
| Product | transposase, IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_001266606 |
|---|
| Protein GI | 148546504 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.812718 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCT TCTTGGGTAT CGATGTTTCC AGTCTCTCCC TTGATGCTGC GGTGCGGCCA
CAGGGCATCA AAATGCATTT AAGCAATGAT CCCACAGGCT TTGAGGCGCT ACTGGAGAGC
CTTCGCAAGC TCAGTATCAA GCGCGTCCTG TTAGAGGCGA CGGGTGGCTA CGAGCGAGAT
GTCATGCGTT TTCTACAGGA CGCTGGCTAC AAGGTCATAC GCGTTAATCC CAGGCGAGCC
AGGTCATTCG CTGACTCTCT AGGCATCAAG GCCAAGACTG ACGCCATCGA CGCCGAGGTT
CTGGCGCACT ATGCCGAAGT CATTCCAGAT CAACCCTCCC TGCGAATCAG CCCCGAACGA
GCGCTTCTGC GAGAGTTGCT TCAGCAACGT GATCGGTTGG TTCAACAGCG AGATGACGAC
CTGCGGCGCC TGAAGCAGGT GCAATCGACT GCAGTTGCTA ACTACCTGAA TGCCAACCTG
AAACACTTCA AAGCGCAGAT CAAACTGGTT GAGCGTGAGA TCGAACAGCA AACCGCGATG
CTGAACGACG AACGGGTTAC CCAACTGATT AAAGTGAAAG GCATTGGGAT GGTGACAGCG
GGCAAGCTAG TAGCGCTGCT GCCGGAGCTG GGTCGGGTTG AATCCAGAGA AATTGCCTCC
CTGGTCGGAG TGGCGCCCTT CAACCACGAC AGTGGGAAAT TCATGGGCAA GCGCTCTATC
TCTGGCGGAC GATTTGCGGT CAGGCGATCG CTGTACATGG CATGCCTTGT GGCGATGAGA
TACAACCCAG CACTCAAGGC TCGTTATCAG TCACTGCGGG AGCGCGGAAA ACTTCCCAAA
GTCGCTATCG TGGCCTGCAT GAGAACGTTC ATCGTGCGGT TAAATGCCAT GCTCAGAACG
GGTACATCAT GGCTCGATCT AGTGCTACCG CAGCCTGAAA GTACAACGTA A
|
|---|
| Protein sequence | MASFLGIDVS SLSLDAAVRP QGIKMHLSND PTGFEALLES LRKLSIKRVL LEATGGYERD
VMRFLQDAGY KVIRVNPRRA RSFADSLGIK AKTDAIDAEV LAHYAEVIPD QPSLRISPER
ALLRELLQQR DRLVQQRDDD LRRLKQVQST AVANYLNANL KHFKAQIKLV EREIEQQTAM
LNDERVTQLI KVKGIGMVTA GKLVALLPEL GRVESREIAS LVGVAPFNHD SGKFMGKRSI
SGGRFAVRRS LYMACLVAMR YNPALKARYQ SLRERGKLPK VAIVACMRTF IVRLNAMLRT
GTSWLDLVLP QPESTT
|
|---|
| |