| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1258 |
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| Symbol | |
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| ID | 5191206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1423636 |
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| End bp | 1424988 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585725 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001266603 |
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| Protein GI | 148546501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.101609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.957729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTG ACCACAGCGC TTCCGGCAAC GGCCAACTTC GCAAAACCCT GCGCCTCTGG
CACGTGATCA TCATCGGCCT GGCTTACCTG ACCCCGATGA CCGTGTTCGA CACCTTCGGC
ATCGTCAGCG GGATCACCGC TGGCCATGTA CCCAGCGCTT ACATCCTGGC ATTGGCCGGC
ATCCTGTTCA CCGCGGTGAG CTATGGCACC CTGGTAAAAC GCTTCCCGCA GTCGGGCTCG
GCCTACACCT ACACCCAGCG CGCGATCAAC CCGCACGTGG GCTTCCTGGT GGGCTGGTCT
TCACTGCTGG ACTACCTGCT GCTGCCGATG GTCAACGCGC TACTGGCCAA GCTGTACCTT
TCGGCCATGT TCCCGGAAGT ACCTGAGTGG ATGTGGGTCG CCGGCTTCGT CACCCTGATC
AGCCTGATCA ACATGCGCAG CGTAAACCTG GTGGCCCACT TCAACCTGCT GTTCGTGGGT
GTACAGGTGG CGATCATCGC CGTGTTCATC TACCTGTGCG TGCGCGGCCT GGACCAGGGC
GAAGGGCTGG GTACCACCTG GAGCCTGATA CCGTTCGCCG ACAGCCAGAC CCAGTTCAGT
GCCCTGGCCG CCGGTGCAAC CATCCTGTGC TTCTCGTTCC TGGGCTTTGA TGCGGTCACC
TGCCTGTCCG AGGAAACCCG CGATCCGGCC AAGACCATTC CCCGGGCGAT CTTCCTCACC
GCACTGATTG GCGGTGTGGT GTTCATCACC GTGTCGTACT TCATCCAGGC CTACTTCCCG
ACCATGGCCC GCTTCCACGA CCAGGAAGCA GCCCTGCCGG AAATTGCCCT GTACGTTGGC
GGCAAGCTCT TCCAGTCGAT CTTCATTGCC TGCACCGTGA TCAACACCAT CGCCTCGGGC
CTGGCCTCGC AAACCAGCGT GTCACGCCTG CTGTATGTAA TGGGCCGCGA CAACGTGATC
CCGGCCAGCG TCTTCGCCCG TTTGCATTCG CGCTACAAGA CGCCAGTGCT GAACATTGCA
GTCGTAGGGC TGATTTCGCT GTCGGCGATC TTCTTCGACC TGGTCACCGC CACTTCCATC
ATCAACTTCG GCGCCCTGGT CGCGTTCAGC TTCGTCAACC TGTCGGTGAT CAACCACTGC
TACCTGCGTG AAGGCAATCG CAAAGGCCTG AGCAACCAGT TGAAGTACCT GGTGCTGCCG
ACCATCGGCT TCTGCATCAT CGTCTCGCTG TGGCTGGACC TGAACGCACA TTCGCTGATG
TTTGGCGGCA TCTGGGCTGC GCTCGGGCTG GTCTACCTGG GCTGGCTGAC CAAAGCCTTC
CGCGCGGCAC CGCCCAACTA CGTCGCCGAA TGA
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| Protein sequence | MQPDHSASGN GQLRKTLRLW HVIIIGLAYL TPMTVFDTFG IVSGITAGHV PSAYILALAG
ILFTAVSYGT LVKRFPQSGS AYTYTQRAIN PHVGFLVGWS SLLDYLLLPM VNALLAKLYL
SAMFPEVPEW MWVAGFVTLI SLINMRSVNL VAHFNLLFVG VQVAIIAVFI YLCVRGLDQG
EGLGTTWSLI PFADSQTQFS ALAAGATILC FSFLGFDAVT CLSEETRDPA KTIPRAIFLT
ALIGGVVFIT VSYFIQAYFP TMARFHDQEA ALPEIALYVG GKLFQSIFIA CTVINTIASG
LASQTSVSRL LYVMGRDNVI PASVFARLHS RYKTPVLNIA VVGLISLSAI FFDLVTATSI
INFGALVAFS FVNLSVINHC YLREGNRKGL SNQLKYLVLP TIGFCIIVSL WLDLNAHSLM
FGGIWAALGL VYLGWLTKAF RAAPPNYVAE
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