| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1242 |
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| Symbol | aspS |
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| ID | 5194972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1408018 |
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| End bp | 1409793 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585708 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001266587 |
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| Protein GI | 148546485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.276348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA GCCATTATTG CGGCCAACTG AACGAGAGCC TGGACGGCCA GGAAGTCACC
CTTTGCGGCT GGGTCCATCG TCGCCGCGAC CACGGCGGGG TGATCTTCCT CGACATCCGT
GACCGCGAAG GCATGGCCCA GGTCGTGTTC GACCCGGATC GCGCCGAAAC CTTCGCTGCT
GCCGACCGTG TGCGCAGCGA ATACGTCGTG CAGATCACCG GCAAGGTCCG CAAGCGTCCT
GAAGGTGCAG TGAATGCCAA CATGGCATCC GGTGCCATCG AGATCCTCGG CTACCAGCTG
AACGTGCTCA ACGAAGCGGA AACCCCGCCG TTCCCCCTGA ACGAATACTC CGACGTCGGC
GAGGAAACTC GCCTGCGTTA TCGCTTCATC GATCTGCGTC GCCCGGAAAT GGCCGACAAG
CTGCGCCTGC GCTCGCGCAT CACCAGCAGC ATCCGTCGCT TCCTCGACGA AAACGGCTTC
CTCGACGTCG AAACCCCGAT CCTCACCCGA GCCACGCCGG AAGGCGCGCG CGACTACCTG
GTGCCAAGCC GTACCCACGC CGGTAGCTTC TTCGCCCTGC CGCAATCGCC ACAGCTGTTC
AAGCAGCTGC TGATGGTCGC TGGCTTCGAC CGTTACTACC AGATCGCCAA GTGCTTCCGT
GACGAAGACC TGCGTGCCGA CCGTCAGCCG GAATTCACCC AGATCGACAT CGAGACCAGT
TTCCTCGATG AAAGCGAGAT CATGGGCCTG ACCGAAAGCA TGATCCGCAA GCTGTTCAAG
GAAGTGCTCG ACCTGGAATT CGGCGAATTC CCGCACATGA CCTTCGAAGA GGCCATGCGC
CGCTACGGCT CCGACAAGCC AGACCTGCGT ATTCCGCTGG AGCTGGTTGA CGTTGCCGAC
CAGCTGAAGG ATGTCGACTT CAAGGTGTTC GCCGGCCCGG CCAACGATCC GAAGTGCCGC
GTTACCGCCT TGCGCCTGCC AGGTGGTGCC AGCATGCCGC GCAGCAAAAT CGACGAGTAC
ACCAAGTTCG TCGGTATCTA CGGTGCCAAG GGGCTGGCCT ACATCAAGGT CAACGAGCGC
GCCAAGGGCG TCGAAGGCCT GCAGTCGCCG ATCGTCAAGA ACATCCCTGA GGCCAACCTC
AACAACATCC TCGATCGCGT TGGCGCCGTA GACGGTGACA TCGTGTTCTT CGGTGCCGAC
AAGTTCAAGG TGGTCAGCGA AGCCCTGGGT GCGCTGCGTA TTCGTCTGGG TCACGACTTC
GAGCTGCTGA CCTGCGAGTG GGCGCCGATG TGGGTCGTCG ACTTCCCAAT GTTCGAAGAG
AACGAAGACG GCAGCTTCAC GGCATTGCAC CACCCGTTCA CCGCGCCGAA GTGCACGCCG
GAAGAGCTCG AGGCCAACCC GGCCACTGCC CTGTCCCGTG CCTACGACAT GGTGCTGAAC
GGTACCGAGC TGGGTGGCGG TTCGATCCGT ATCCACCGGA AAGAGATGCA ACAGGCAGTA
TTCCGGCTGT TGGGTATCGA GGCAGAAGAA CAGGAAGAGA AGTTTGGCTT CCTGCTCGAC
GCTCTGAAGT TCGGGGCACC GCCTCACGGT GGCCTGGCGT TCGGTCTGGA CCGTCTGGTC
ATGCTGATGA CCGGCGCTCA GTCGATCCGT GAAGTGATCG CGTTCCCGAA AACCCAGAGC
GCCGCATGCG TCATGACCCA GGCCCCTGGC ATGGTCGACG CCAAGGCCCT GCGCGAGCTG
CACATCCGAC TGCGCGAACA GACCAAGGTC GAGTAA
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| Protein sequence | MMRSHYCGQL NESLDGQEVT LCGWVHRRRD HGGVIFLDIR DREGMAQVVF DPDRAETFAA
ADRVRSEYVV QITGKVRKRP EGAVNANMAS GAIEILGYQL NVLNEAETPP FPLNEYSDVG
EETRLRYRFI DLRRPEMADK LRLRSRITSS IRRFLDENGF LDVETPILTR ATPEGARDYL
VPSRTHAGSF FALPQSPQLF KQLLMVAGFD RYYQIAKCFR DEDLRADRQP EFTQIDIETS
FLDESEIMGL TESMIRKLFK EVLDLEFGEF PHMTFEEAMR RYGSDKPDLR IPLELVDVAD
QLKDVDFKVF AGPANDPKCR VTALRLPGGA SMPRSKIDEY TKFVGIYGAK GLAYIKVNER
AKGVEGLQSP IVKNIPEANL NNILDRVGAV DGDIVFFGAD KFKVVSEALG ALRIRLGHDF
ELLTCEWAPM WVVDFPMFEE NEDGSFTALH HPFTAPKCTP EELEANPATA LSRAYDMVLN
GTELGGGSIR IHRKEMQQAV FRLLGIEAEE QEEKFGFLLD ALKFGAPPHG GLAFGLDRLV
MLMTGAQSIR EVIAFPKTQS AACVMTQAPG MVDAKALREL HIRLREQTKV E
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