| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1239 |
|---|
| Symbol | |
|---|
| ID | 5192113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1406419 |
|---|
| End bp | 1406892 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640585705 |
|---|
| Product | Ferritin, Dps family protein |
|---|
| Protein accession | YP_001266584 |
|---|
| Protein GI | 148546482 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.698815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCG ATATCGGTAT CAGTGAAGAA GATCGCAAGT CCATCGTCGA TGGGCTGTCC
CGCCTGTTGT CGGATACCTA CGTGCTGTAT CTGAAAACCC ATAACTTTCA CTGGAACGTC
ACCGGCCCGT CGTTCCGCAC CCTGCACCTG ATGTTCGAAG AGCAGTACAA CGAACTGGCG
CTGGCAGTCG ATTCGATCGC CGAGCGCATC CGTGCCTTGG GCTTCCCGGC ACCGGGTTCG
TATGCATTTT ATGCACGGCA CTCGTCGATC AAGGAGGAGG AAGGCGTCCC CCCGGCAGAC
GAGATGATCC GCCAGTTGGT TCAGGGGCAG GAGGCCGTGG TACGCACTGC GCGCAGCATT
TTCCCTGTGG TGGACAAGGT CAGTGACGAG CCGACCGCCG ACCTGCTGAC ACAGCGCATG
CAGGTGCACG AGAAAACCGC CTGGATGCTG CGGGTACTGC TCGACGGCGA GTAA
|
|---|
| Protein sequence | MAIDIGISEE DRKSIVDGLS RLLSDTYVLY LKTHNFHWNV TGPSFRTLHL MFEEQYNELA
LAVDSIAERI RALGFPAPGS YAFYARHSSI KEEEGVPPAD EMIRQLVQGQ EAVVRTARSI
FPVVDKVSDE PTADLLTQRM QVHEKTAWML RVLLDGE
|
|---|
| |