| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1235 |
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| Symbol | |
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| ID | 5193830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1402839 |
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| End bp | 1404104 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585701 |
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| Product | outer membrane porin |
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| Protein accession | YP_001266580 |
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| Protein GI | 148546478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.188174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGA TGAAGTGGAG CATGATCGCC CTGGCCGTTT CGGCAGGGAC CTCGCAGTTG
GCAATGGCCT CGGCACAGGA CGAGTCCAAA GGTTTCATCG AAGACAGCAA GCTGAGCGTC
AAGACCCGCA TGCTGTATTT CAGCCGTGAC TTCCGCAACA ACGAAGGCGG TCAGAGCCGT
CGCGAAGAAA CCGGCCTGGG CTTCGTCGGC ACCTTCGAGT CCGGCTTCAC CCAAGGCACC
GTGGGTGTAG GTGTCGACGC CATCGGCATG CTCGGCCTGA AACTGGACAG CGGCAAGGGC
CGTGCCGGTA CCGGCCTGTT CCCGACCGGT TCCGACGGCC GTTCGCAGGA TGACTACTCC
AAGGGCGGCG GCGCGGTCAA ATTCCGCATC TCCGACACCG TGCTGAAAGT GGGTGACCAG
TTCACCGCGC TGCCGGTCTT CGCCACCGAT GACAGCCGCC TGCTGCCAGA AATCGCCCAG
GGCACCCTGA TCACCAGCAA CGAGATCGAA GGGCTGACCC TGCACGCTGG TCACTTCACC
AGCCTGACTG CCCAGGAACA AACCAACCGC GACAGCTTCG GCCTGAAGGA AGCCAACGTG
GTCGGCGGCA CCTACGCCTT CACCGACAAC CTCAGCACCA GCCTGTACTA CTCGAAGGTT
GAAGACTACT GGCGCAAATA CTACGCCAAC GTCAACTGGG CGCTGCCAAT CTCCGACAAT
CAAGGCCTGG TGTTCGACTT CAACATCTAT GACACCAAGA GCGAAGGCTC TGCCGAGTAC
CGCGCATTCG ATGGCGAGAA GCTGGACAAC CGCGCGTTCA GCCTGTCGGG CGCCTACAAC
ATCGGCGCTC ACACCTTCAC CCTGGCCTAC CAGAAAGTCA CCGGCGACGG CGACTATGGT
TATGGTATCG ACGGTGGCGG CACCATCTTC CTGGCCAACT CCGTGGCCCG CTCCGACTTC
AACGCCGAAG ACGAGAAATC CTGGCAGGCT CGCTACGACC TGAACTTTGC CGAATACGGC
ATTCCAGGCC TGACCTTCAT GACCCGTTAT GTACGCGGTT CCGACGCCAA CGTCGCCGGC
ACCACCAACG GCAAAGAATG GGAACGCGAC GTCGACATCA AGTACGTGCT GCAGGAAGGC
CCGGCGAAAG ACCTGAGCTT CCGCGTGCGT CAAGCCACCT ACCGTTCTTC CGATGGTGTC
TACTACGATT CCCCATCGAT CGACGAACTG CGCCTGATCG TGGAGTACCC GCTGAGCATC
CTGTAA
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| Protein sequence | MRVMKWSMIA LAVSAGTSQL AMASAQDESK GFIEDSKLSV KTRMLYFSRD FRNNEGGQSR
REETGLGFVG TFESGFTQGT VGVGVDAIGM LGLKLDSGKG RAGTGLFPTG SDGRSQDDYS
KGGGAVKFRI SDTVLKVGDQ FTALPVFATD DSRLLPEIAQ GTLITSNEIE GLTLHAGHFT
SLTAQEQTNR DSFGLKEANV VGGTYAFTDN LSTSLYYSKV EDYWRKYYAN VNWALPISDN
QGLVFDFNIY DTKSEGSAEY RAFDGEKLDN RAFSLSGAYN IGAHTFTLAY QKVTGDGDYG
YGIDGGGTIF LANSVARSDF NAEDEKSWQA RYDLNFAEYG IPGLTFMTRY VRGSDANVAG
TTNGKEWERD VDIKYVLQEG PAKDLSFRVR QATYRSSDGV YYDSPSIDEL RLIVEYPLSI
L
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