Gene Pput_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1214 
Symbol 
ID5195304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1377648 
End bp1378439 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID640585677 
Productdienelactone hydrolase 
Protein accessionYP_001266559 
Protein GI148546457 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.602009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCC TGCTGGCCCT GACCCTGATG TGCAGCGCCG CCCTCGCCCA AGCGGCGGTA 
GTGACCCGTG AAATTCCTTA TCAGGACGAC GATGGCAACC GCCTCGTCGG CTACTACGCC
TACGATGACG CGCTGGACGG CAAACGCCCA GGCATCGTTG TGGTGCATGA ATGGTGGGGC
CTGAACGACT ATGCCAAGCG TCGTGCGAGA GATCTTGCCG CCCTGGGCTA CAAGGCACTG
GCCATCGACA TGTACGGCGA TGGCAAGCAC ACCGAGCATC CGCAGGATGC CCAGGCATTC
ATGGCCGCAG CGATGAAGGA CCCGGCCGCA GCAGCAGCAC GCTTCGACGC GGGCCTGGAG
TTGTTGAAAA AGCAGCCGAA TGTGAACAAG CATCAACTGG GCGCTGTCGG CTACTGTTTT
GGCGGCAAGG TGGTGCTCGA TGCCGCACGC CGGGGAGAAA AGCTCGATGG CGTGGTGAGC
TTCCATGGCG CACTGGCCAC CCAGACCCCG GCAAAACCTG GCGTGGTGCG GGCCGATATC
CTGGTCGAGC ATGGTGCAGC GGACAGCATG ATCACCCCAC AGCAGGTGGA GGCGTTCAAG
GCCGAGATGG ATGCGGCCAA GGTCAACTAC CAGTTCGTCA GTATTGAAGG GGCCAAGCAC
GGGTTCACCA ACCCCGATGC CGATCGGCTC AGCCACGGTG AACATGGGGG GCCGGACATT
GGCTATAACA AGGCAGCGGA CGAGCGTTCC TGGGCGGATA TGCAGGCGTT CTTCAAGAAG
GTGTTCAAAT AA
 
Protein sequence
MRALLALTLM CSAALAQAAV VTREIPYQDD DGNRLVGYYA YDDALDGKRP GIVVVHEWWG 
LNDYAKRRAR DLAALGYKAL AIDMYGDGKH TEHPQDAQAF MAAAMKDPAA AAARFDAGLE
LLKKQPNVNK HQLGAVGYCF GGKVVLDAAR RGEKLDGVVS FHGALATQTP AKPGVVRADI
LVEHGAADSM ITPQQVEAFK AEMDAAKVNY QFVSIEGAKH GFTNPDADRL SHGEHGGPDI
GYNKAADERS WADMQAFFKK VFK