Gene Pput_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1209 
Symbol 
ID5195070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1368317 
End bp1369564 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content59% 
IMG OID640585672 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_001266554 
Protein GI148546452 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCT GGGACGAATT CGACAAGGAC GAAAACGAAG TCACCACTAA AGGCCAAAGC 
AGTACTCAAG CCAGCCAGCC GGGTATCGAT AAACTCGACA GCGCCGGCGG TGCGGCCGCC
TTGGAAGCGC GTGCTGTTGT TGCTACCGAC TCCGAAGCCG TCAAACGTGC CAAGGCTGCC
CTCGACGCCC TCGACGTTGC CGAAGGCCTG GCCGAGCTGG AAGGCTCCTC GGCCCGCGTT
GCAGTCGATG AAAAGCGCAT GATCAACTGC CGCGCCGACC TCAACCAGCT GGTACCGTTC
AAGTACGACT GGGCCTGGCA GAAGTACCTG GACGGCTGCG CCAACCACTG GATGCCGCAA
GAGGTCAACA TGACCGCCGA CATCGCCCTG TGGAAGAGCC AAGACGGCCT GACCGAAGAC
GAGCGCCGCA TCGTCATGCG CAACCTCGGT TTCTTCTCCA CTGCCGACTC GCTGGTTGCC
AACAACCTGG CCCTGGCCGT GTACCGCCTG ATCACCAACC CGGAGTGCCG CCAGTACATC
CTGCGCCAGG CCTTCGAAGA GGCGATCCAC ACCCACGCCT ACCAGTACTG CATCGAGTCG
CTGGGCATGG ATGAAGGCGA GATCTTCAAC ATGTACCACG AGATCCCGTC GGTCGCTAAA
AAAGCCGCCT GGGGCCTGAA GTACACCCGC GCCATCTCCG ACCCGGAATT CAACACCGGC
ACCGTCGAAA CCGACAAAGA GCTGCTGCGC AACCTGATCG CCTACTACTG CGTTCTGGAA
GGCATCTTCT TCTACTGCGG CTTCACCCAG ATCCTGTCCA TGGGCCGCCG CAACAAGATG
ACCGGCGTTG CCGAGCAGTT CCAGTACATC CTGCGTGACG AGTCGATGCA CCTGAACTTC
GGTATCGACG TGATCAACCA GATCAAGATC GAAAACCCGC ACCTGTGGGA TGCGGCGATG
AAGGAAGAAG CGACCCAGAT GATCCTGCAA GGGACCCAGC TGGAGATCGA ATACGCCCGT
GACACCATGC CACGCGGCGT ACTGGGCATG AACGCAGCGA TGATGGAGGA TTACCTCAAG
TTCATCGCCA ACCGTCGCCT GACCCAGATT GGTTTGAAAG AAGAGTACCC AGGGACTACC
AACCCGTTCC CATGGATGAG CGAGATCATG GACTTGAAGA AGGAGAAGAA CTTCTTTGAG
ACGCGTGTGA TTGAGTATCA GACTGGTGGG GCGTTGAGCT GGGATTGA
 
Protein sequence
MLSWDEFDKD ENEVTTKGQS STQASQPGID KLDSAGGAAA LEARAVVATD SEAVKRAKAA 
LDALDVAEGL AELEGSSARV AVDEKRMINC RADLNQLVPF KYDWAWQKYL DGCANHWMPQ
EVNMTADIAL WKSQDGLTED ERRIVMRNLG FFSTADSLVA NNLALAVYRL ITNPECRQYI
LRQAFEEAIH THAYQYCIES LGMDEGEIFN MYHEIPSVAK KAAWGLKYTR AISDPEFNTG
TVETDKELLR NLIAYYCVLE GIFFYCGFTQ ILSMGRRNKM TGVAEQFQYI LRDESMHLNF
GIDVINQIKI ENPHLWDAAM KEEATQMILQ GTQLEIEYAR DTMPRGVLGM NAAMMEDYLK
FIANRRLTQI GLKEEYPGTT NPFPWMSEIM DLKKEKNFFE TRVIEYQTGG ALSWD