Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1206 |
Symbol | |
ID | 5190727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1365367 |
End bp | 1366605 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585669 |
Product | outer membrane porin |
Protein accession | YP_001266551 |
Protein GI | 148546449 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT GCCACACCCT ACCCTTCGCC CTGCTTGGCG CCGGGGTTAT CGCCGGCCTG CCGGGCACTA GCCTGGCAGC GGGATTTGTC GAGGACAGCA AGGCCACCCT CGGGCTGCGC AACTTCTACA TCAACCGCAA CTTCACCAAC CCCAGCAACC CACAGAGCAA GGCCGAGGAG TGGACGCAAA GCTTCATTCT CGATGCCCGC TCGGGGTTCA CAGAAGGGCC AATCGGCTTC GGCGTGGATG TGCTGGGGCT GTGGTCCGTC AAGCTCGACG GCGGTGGCGG TACCTATGGC ACGGCGTTGC TGCCACGCCA TGACGATGGC AAGCCTGCTG ACGATTACGG GCGCCTGGCG GTGGCAGGCA AGGCTCGCAT CTCCAAGACC GAGCTGAAAA TCGGTGAGTG GATGCCGGTG CTGCCGATTC TTCGCTCGGA CGACGGTCGC TCGTTGCCGC AGACGTTCCG TGGCGGCCAG GTTACGTCCA ACGAGATTGC CGGCCTGACC TTGTACGGTG GGCAGTTCCG CGGCAACAGC CCGCGCAACG ACGCCAGCAT GGAAGACATG AGCTACGGCG GCGGCGTGTC GGACCGTTTC AACTTCGTCG GCGGCGAGTA CAAGTTCAAC AAGGACCGTA CCCTGGTCGG GCTGTGGAAT GCGGTGCTCA AGGACGTGTA TCAGCAGCAG TACCTGCAAC TGAGCCACAG CCAGCCGGTG GGTGACTGGA CCCTGGGTGC GAACCTGGGC TACTTCCATG GCGACGAGGA CGGCTCCGAA CGCGCCGGGC AGCTGGACAA CAAGACCTAC TCGGGGATGT TCTCGGCCAA GTACGGTGGC AGCACCTTCT GGGTGGGGCT GCAGAAAGTC GATGGTGATA CCTGGATGCG GGTAAACGGC ACCAGTGGCG GGACCTTGGC CAACGACAGT TACAACTCCA GCTTCGACAA TGCCAACGAG CGTTCGTGGC AGGTACGCCA TGACTTCAAC TTCGTCACCG TCGGGGTGCC AGGGCTGACC TTGATGAACC GCTACATCAG CGGGCGCGAT GTGCACAGCG GGGGGGTGAC CGATGGCAAG GAGTGGGTGC GTGAAACGGA GCTTGCGTAT GTGATCCAGA GCGGGGCATT CAAGGATTTG AGTGTGAAAT GGCGTAACTC GTCGATTCGC CGGGATTACA GCAATAACGA GTTTGATGAG AACCGGCTGA TCTTCAACTA CCCATTGTCG TTGCTCTGA
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Protein sequence | MKICHTLPFA LLGAGVIAGL PGTSLAAGFV EDSKATLGLR NFYINRNFTN PSNPQSKAEE WTQSFILDAR SGFTEGPIGF GVDVLGLWSV KLDGGGGTYG TALLPRHDDG KPADDYGRLA VAGKARISKT ELKIGEWMPV LPILRSDDGR SLPQTFRGGQ VTSNEIAGLT LYGGQFRGNS PRNDASMEDM SYGGGVSDRF NFVGGEYKFN KDRTLVGLWN AVLKDVYQQQ YLQLSHSQPV GDWTLGANLG YFHGDEDGSE RAGQLDNKTY SGMFSAKYGG STFWVGLQKV DGDTWMRVNG TSGGTLANDS YNSSFDNANE RSWQVRHDFN FVTVGVPGLT LMNRYISGRD VHSGGVTDGK EWVRETELAY VIQSGAFKDL SVKWRNSSIR RDYSNNEFDE NRLIFNYPLS LL
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