Gene Pput_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1167 
Symbol 
ID5194232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1315440 
End bp1315904 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID640585625 
Product17 kDa surface antigen 
Protein accessionYP_001266512 
Protein GI148546410 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAT CCGCTTTGCT GGTGGCGACC TTTACCACCA TGTCGCTGCT GCTGGGGGGC 
TGTGCCTCGA GCCTGACCGG TGACAGCTAC TCTCGTGACG AAGCCCGCCG CGTGCAAACC
GTGCGTATGG GTACCATCGA ATCCCTGCGT CCGGTCAAGA TCGAGGGTAC CAAGACCCCG
ATTGGCGGCG GTGCCGGTGC CATCGTGGGT GGCGTAGCTG GCAGCGCCGT GGGCGGTGGC
CGTGGCAGCA TCGTGGCTGC CGTGATCGGT GCCGTGGCCG GTGGCTTGGC GGGTTCCGCA
GCAGAAGAAG GCCTGACCCG TACTCAAGGT GTCGAAATTA CCGTTCGTGA AGATGATGGC
AGCATGCGCG CCTATGTGCA GGCCGTACAG GAGAACGAAG TCTTCCGCGT TGGCGAGCGC
GTGCGCATCA TGACAGTTGA CGGTACCAGC CGCGTTTCGC ACTGA
 
Protein sequence
MRKSALLVAT FTTMSLLLGG CASSLTGDSY SRDEARRVQT VRMGTIESLR PVKIEGTKTP 
IGGGAGAIVG GVAGSAVGGG RGSIVAAVIG AVAGGLAGSA AEEGLTRTQG VEITVREDDG
SMRAYVQAVQ ENEVFRVGER VRIMTVDGTS RVSH