| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1148 |
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| Symbol | |
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| ID | 5192137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1297877 |
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| End bp | 1299217 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585606 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001266493 |
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| Protein GI | 148546391 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.976845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCT GCAGCCTTCA TCACCTTTTG AAACAACGCC TGGATGCAGG CGAGTGGTTG
CCCGGGCAAC GCATGCCCTC CATCCGCAAG CTGACCGCTG CTGTGGACTT CAGTTACCAC
GACGTCGTGT CGGCCTATGC CCAGCTGGTC AGCGAAGGGG TATTGACGGC ATCACCTGGG
CGAGGCTACT TCGTGGCAAA CCGCGCCAGG CAGACCAGCG TGATCCACGA ACCCGAATGC
ATGGCCGGCG ACCCCCTGTT CCGGCTGCTG CAGGGCGGCC AGCACTTCAC CAAGCTGGGC
AGCGGCTGGC TGCCCCCCGC GTGGCGCGAC ACCGAACTGC TGGCCAAGGC AATTCGTCGC
ACAGCGCGAC TGGAGCAGAG CTCGCTGGCA GAGTACGGCG ACATCCAGGG GTACCTGCCC
ATGCGCAAAC AGCTGTGCGT GCACATGAAA CGGCTGACCC GTGTCGAAGC CCGGCCCAAC
CAGCTGCTGA CCACACTGGG TGCCACGCAA GGCCTGGACC TGGTTGCACG GTTGCTGATC
AAACCGGGCG ACCACGTTTT CGTCGACGAG CCGGGCAACG GCAACCTGAT CAAGCTGATC
CAACTGGCTG GCGGGCACGT CGTCGGCATT CGGCGGACCC AGGACGGGCC AGATGTGGAA
GAAATGAGAA GCCACCTGGC CAGGCACAAG GTCAAGGCGT TTTTCTGCAA CAGCACCTTC
CACAACCCGA CCGGCAGCAA CATCAGCCCG CACAACGCCT TCAGCGTCCT GCGCCTGGCG
GTGGAACACG AGTTCTTCGT GGTCGAGGAC GATGTCTATG GGGACTTCAG CCCTGCTGTG
CGCCAGACCT TTGCCGAGCT GGACAACCTT GACCGGGTTA TCTACATCGG CAGCTTCTCC
AAATGCCTGT CGGCATCGCT GCGCGTGGGG TTCATTGCCT GCTCGCAAGA CCTGATCGAA
CCGCTCACAC GCCTTAAACT GCTGACCTGC GTCGCCGTCC CCGCGTTTTG CGAACGCTTC
GTCAACACCA TATTGTCGGA TGGCACGTAT GCCCGGCACA TGAAAGACGT GCAGCAGCGC
CTGATCCGCC AGCAAGTGCA AACCCAACGC TTGCTGCTTG AGCGCGGCTG GCAGTTCGAT
ATTGCGCCGC AAGGGGGTAT GTTCCTTTGG GTCTACCACC CGGACCTGCC CGACCTGCAA
CCTTTCATGC GTAAACTGGA GCAGCACAAG ATCCTGCTGA TGCCGGGCTC TGCATTCGCG
GTGAGCCGTG ACTACCAACG CTACACGCGC ATCAATTGCA CGCATTTTTC CGACGCCTTG
GCCGAGCACT TCGAGGTTTG A
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| Protein sequence | MIPCSLHHLL KQRLDAGEWL PGQRMPSIRK LTAAVDFSYH DVVSAYAQLV SEGVLTASPG
RGYFVANRAR QTSVIHEPEC MAGDPLFRLL QGGQHFTKLG SGWLPPAWRD TELLAKAIRR
TARLEQSSLA EYGDIQGYLP MRKQLCVHMK RLTRVEARPN QLLTTLGATQ GLDLVARLLI
KPGDHVFVDE PGNGNLIKLI QLAGGHVVGI RRTQDGPDVE EMRSHLARHK VKAFFCNSTF
HNPTGSNISP HNAFSVLRLA VEHEFFVVED DVYGDFSPAV RQTFAELDNL DRVIYIGSFS
KCLSASLRVG FIACSQDLIE PLTRLKLLTC VAVPAFCERF VNTILSDGTY ARHMKDVQQR
LIRQQVQTQR LLLERGWQFD IAPQGGMFLW VYHPDLPDLQ PFMRKLEQHK ILLMPGSAFA
VSRDYQRYTR INCTHFSDAL AEHFEV
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