| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1131 |
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| Symbol | |
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| ID | 5194433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1278720 |
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| End bp | 1279430 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640585589 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001266476 |
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| Protein GI | 148546374 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.796271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.799889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCG CTGGTAAATC GCCGCGCCAT CAAGCGTCCT GTCGGTTATC GTGGCGTGCC
AAAGCAACAA CACTGTATGG ATATCGCATG AATAAAGTGC TTATCGTGGA TGATCATCCG
GTCATACGCC TGGCCGTACG CATGCTGATG GAGCGGCATG GGTATGACGT TGTGGCGGAG
ACTGACAATG GGGTAGCTGC GCTGCAGCTG ACACGGCAAC ACCTGCCGGA TATTGTGGTG
CTGGATATCG GTATCCCGAA ACTGGATGGC CTGGAGGTGA TCGCCCGCAT GGCGACATTC
AGCCCGGGTA GCAAGGTACT GGTGCTGACG TCGCAGGCCC CCGGCAACTT TTCGATGCGC
TGCATGCAGG CAGGGGCGGC GGGTTACGTG TGCAAGCAGC AGGAGCTTAC CGAACTGCTC
AGCGCTATCA AGGCTGTGTT GTCGGGTTAC AGCTACTTCC CCAACCAGGC CTTGCATGCG
TCACGTGGCA GGGGGGCGGG CAGCGAGACG GATATGGTGA ATCGCCTGTC TGCGCGAGAA
ATGACGGTGC TGCAACAACT GGCGCGAGGG CGTTCGAACA AGGAGATTGC CGACAGCATG
TACCTCAGTA ACAAGACGGT CAGTACCTAC AAGTCGCGGC TGTTGCTCAA GCTCAATGCA
CGGTCGCTGG TTGACCTGAT CGAGCTGGCG CAACGGCAAG GTCTGAACTG A
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| Protein sequence | MAFAGKSPRH QASCRLSWRA KATTLYGYRM NKVLIVDDHP VIRLAVRMLM ERHGYDVVAE
TDNGVAALQL TRQHLPDIVV LDIGIPKLDG LEVIARMATF SPGSKVLVLT SQAPGNFSMR
CMQAGAAGYV CKQQELTELL SAIKAVLSGY SYFPNQALHA SRGRGAGSET DMVNRLSARE
MTVLQQLARG RSNKEIADSM YLSNKTVSTY KSRLLLKLNA RSLVDLIELA QRQGLN
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