Gene Pput_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1128 
Symbol 
ID5195208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1275137 
End bp1276078 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID640585586 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001266473 
Protein GI148546371 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCAGC GTTACCTAGC CCTGTTGACC CTGTTCGCCA GCCTGCCGGC CGGCGCACTG 
ACTTTCCAGA CGCGCATGGA AAATATTGCC TGGAAGGTCG AGGGTGACCA GTTCGAGTGC
CGTCTGAGCC AGCCGATCGA AGGTTTCGGC AGCGGTACGT TCGTGCGTCG GGCAGGCGAG
CAGCCGGTGT TCCAGCTGCG GTCGGACAGC AACGTACTGG GTGCAGGCAC CGCCAGCCTG
CTGGCCGCGG CAGCGCCGTG GCAACCAGGG CGTGGCGATA TCAACCTGGG CAATGTGCGT
ATGGCCCGCA GTGGTGTGCT GTTCAGCTCC TCCCAAGGGC AGGCCAGCCG GCTGATCAAC
GGCTTGCTCG ACGGGCGTAG CACCGTCGTG CGCAACTACA CCGGTGAGGC GGGCAGGCCG
ATGGAGGTGC GAGTGCTGCC GGTCAGCTTC GCCAAAGCCT ACAATGACTA TCAGGTCTGT
GCTGGCAAAC TGTTGCCGAT GAACTACGAC CAGGTGCGCC AGACCCAGGT GGGTTTCCCC
GGGGGCGGTA TCGAGCTGGA TGCAGCAGCC AAGGCGCGGC TGGACGTGAT CCTCGATTAC
ATGAAAGCCG ACCCGACGGT GAATCATGTC GAGCTCAACG GCCACTCCGA CAACAGTGGC
AACCGCCTTA CCAACCGCGA CCTGTCGCGC CGTCGGGCAT TGGCCGTTGC CGATTACTTC
AAGGCTAACG GTGTGCCGGA GGAGCAGATC ACTGTGCGCT TCCATGGCGA ACGTTATCCG
CTCGCGAAGA ACAACAGTGC GTCGAATCGG GCGCGTAATC GGCGGGTGAA TATCGAGCTG
GATCGGGTGG CGGTGGTTGA GAAACCGGTG GAAAAGCCGG TTGAGCAAGC GGCGCCGGCT
GTTGCACCTG CCTCGGGCGT CCCGGGGGCG AAGGCGCCCT GA
 
Protein sequence
MRQRYLALLT LFASLPAGAL TFQTRMENIA WKVEGDQFEC RLSQPIEGFG SGTFVRRAGE 
QPVFQLRSDS NVLGAGTASL LAAAAPWQPG RGDINLGNVR MARSGVLFSS SQGQASRLIN
GLLDGRSTVV RNYTGEAGRP MEVRVLPVSF AKAYNDYQVC AGKLLPMNYD QVRQTQVGFP
GGGIELDAAA KARLDVILDY MKADPTVNHV ELNGHSDNSG NRLTNRDLSR RRALAVADYF
KANGVPEEQI TVRFHGERYP LAKNNSASNR ARNRRVNIEL DRVAVVEKPV EKPVEQAAPA
VAPASGVPGA KAP