Gene Pput_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1118 
Symbol 
ID5194653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1265826 
End bp1266296 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID640585576 
ProductybaK/ebsC protein 
Protein accessionYP_001266463 
Protein GI148546361 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.081988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG CCCTAGACCT GTTGAAGAAG CACCGTGCCG AGCATCGTGT GCACAGTTAT 
GAACATGACC CGAAGTCGGC GTCGTATGGC CTGGAGGCGG CAGAAAAGCT CGGGCTCGAC
CCGCAACAGG TGTTCAAGAC GTTGCTGGCA AGCAGCGAGA AAGGGGAATT GCTGGTAGCG
GTTGTGCCGG TGGTGGGTAC CCTGGACCTC AAGGCCCTGG CCCATGCTGC CGGGGTGAAG
AAGTGCGAGA TGGCCGACCC GGCGGCGGCG CAGCGGGCGA CCGGTTACCT GGTGGGCGGC
ATCAGCCCGC TGGGGCAGAA GAAGCGCCTG CGTACCTTTA TTGATGACTC GGCGCAGAAT
TTTGCAACTA TCCATGTCAG CGCCGGCAGG CGTGGCCTGG AAGTGGAGTT GGCAGCGGCG
GTGCTGGCGG AGTATACGCA GGGCACGTTT GCCGGGATCG GCAGAGGCTG A
 
Protein sequence
MTPALDLLKK HRAEHRVHSY EHDPKSASYG LEAAEKLGLD PQQVFKTLLA SSEKGELLVA 
VVPVVGTLDL KALAHAAGVK KCEMADPAAA QRATGYLVGG ISPLGQKKRL RTFIDDSAQN
FATIHVSAGR RGLEVELAAA VLAEYTQGTF AGIGRG