| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1100 |
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| Symbol | |
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| ID | 5193691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1238487 |
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| End bp | 1239905 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585558 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001266445 |
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| Protein GI | 148546343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0119846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.968879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCG GCAACCACTC TGCCCACGGC CAGGCCACAG AAGGCGGCCC GCTCAAGCGT
GAACTGGGCG AACGGCACAT CCGCCTGATG GCGCTGGGCG CCTGTATCGG TGTCGGTCTT
TTCCTCGGTT CGGCCAAGGC GATCGAAATG GCCGGTCCGG CCATCATGTT GTCCTACATC
ATCGGCGGCC TGGCCATCCT GGTGATCATG CGCGCCCTTG GTGAAATGGC CGTGCACAAC
CCCGTCGCCG GCTCGTTCAG CCGTTATGCC CAGGATTACC TCGGCCCATT GGCAGGCTTC
CTGACCGGCT GGAACTACTG GTTCCTGTGG CTGGTGACCT GTGTTGCCGA AATCACGGCA
GTGGCCATCT ACATGGGCAT CTGGTTCCCC GACGTTCCGC GCTGGATCTG GGCCCTGGCG
GCGCTGGGCA GCATGGGCGC GGTCAACCTG GTGGCGGTGA AGGCTTTTGG TGAGTTCGAG
TTCTGGTTCG CGCTGATCAA GATCGTCACC ATCATCGCCA TGGTGCTTGG CGGCATCGGC
ATCATTGCCT TCGGCTTTGG CAATGACGGT GTGGCAGTGG GGATCTCCAA CCTGTGGAGC
AACGGCGGCT TCATGCCCAA TGGCGTGACC GGCGTGCTGA TGTCGCTGCA GATGGTGATG
TTCGCCTATC TGGGCGTGGA AATGATCGGT CTCACCGCCG GTGAAGCACG CAACCCGCAA
AAGACCATTC CCCAGGCCAT CGGCTCGGTG TTCTGGCGCA TCCTGCTGTT CTACGTCGGC
GCGTTGTTCG TGATCCTGTC GATTTACCCG TGGAACGAAA TCGGTAGCCA GGGCAGCCCG
TTCGTCATGA CCTTCGAGCG CCTCGGCATC AAGACCGCCG CCGGCATCAT CAACTTCGTG
GTCATCACGG CGGCGCTTTC GTCGTGCAAT GGCGGCATCT TCAGCACCGG GCGCATGCTT
TATAGCCTGG CGCAGAACGG CCAGGCGCCG GCGGCCTTCG CCCGCACCTC GAAGAACGGC
GTGCCACGCA ATGCGCTGCT GCTGTCGATC GGCGCGTTGC TGCTGGGCGT GCTGGCCAAC
TACCTGGTGC CAGAAAAGGT CTTCGTCTGG GTGACCTCGA TCGCCACCTT CGGTGCGATC
TGGACCTGGG TGATGATCTT GCTGGCACAG CTGAAGTTCC GTGCCGGCCT TACCACGGCC
GAGCGCAAGG CACTGAAGTA CCGCATGTGG CTGTGGCCGC TGAGCTCGTA TCTGGCACTG
GCCTTCCTGG TGCTGGTGGT CGGGCTGATG GCGTACTTTG AGGATACGCG TGTGGCCCTG
TACATCGGCC CGGCGTTCCT GGTGTTGCTG ACAGTGCTGT ATTACACGTT CCGCCTGGCG
CCGAAAGACG CACAAGGCGT GACGAGTACA GCCTCCTGA
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| Protein sequence | MPVGNHSAHG QATEGGPLKR ELGERHIRLM ALGACIGVGL FLGSAKAIEM AGPAIMLSYI
IGGLAILVIM RALGEMAVHN PVAGSFSRYA QDYLGPLAGF LTGWNYWFLW LVTCVAEITA
VAIYMGIWFP DVPRWIWALA ALGSMGAVNL VAVKAFGEFE FWFALIKIVT IIAMVLGGIG
IIAFGFGNDG VAVGISNLWS NGGFMPNGVT GVLMSLQMVM FAYLGVEMIG LTAGEARNPQ
KTIPQAIGSV FWRILLFYVG ALFVILSIYP WNEIGSQGSP FVMTFERLGI KTAAGIINFV
VITAALSSCN GGIFSTGRML YSLAQNGQAP AAFARTSKNG VPRNALLLSI GALLLGVLAN
YLVPEKVFVW VTSIATFGAI WTWVMILLAQ LKFRAGLTTA ERKALKYRMW LWPLSSYLAL
AFLVLVVGLM AYFEDTRVAL YIGPAFLVLL TVLYYTFRLA PKDAQGVTST AS
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