| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1078 |
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| Symbol | |
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| ID | 5190762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1213699 |
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| End bp | 1217598 |
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| Gene Length | 3900 bp |
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| Protein Length | 1299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585536 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_001266423 |
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| Protein GI | 148546321 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.528102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATCC TGCGCGGCGC TCCTGCCCTT TCTGCCTTTC GCCACGGTAA ATTACTCGAG
CAACTGAGCC AGAAAGTCCC CGCTGTTACT GGTTTGTATG CCGAATTTGC CCACTTCGCC
GATGTTGACG GCGAGCTGAC CGCCGACCAG CAGCAGGTGC TGGGCCGTCT GCTCAAGTAC
GGCCCGAGCG TGCCGGTACA GGAGCCGACG GGTCGTCTGT TCCTGGTGGT ACCGCGCCTG
GGCACCATTT CGCCATGGGC CAGCAAGGCC AGCGACATCG CCCACAACTG CGGCCTGCAG
TCGATCCAGC GCCTGGAGCG CGGCATCGCC TACTACGTGG CCGGCACCCT GAGCGACGCT
GACGCCGCCC TGATCGCCGC CGAACTGCAC GACCGCATGA CCCAGCGTGT GCTCAGCCAG
CTGGAGCAGG CCGCTGACCT GTTCAGCCAC GCCCAGCCCA AGCCAATGAC CTCGGTCGAC
ATCCTGGCCG GCGGCCGTGA CGCCCTGGCC AAGGCCAACA TCGACCTGGG TCTGGCCCTG
GCCGAAGACG AGATCGACTA CCTGGTCAAT GCCTTCCAAG GCCTCAAGCG CAACCCGAAC
GACATCGAAC TGATGATGTT CGCCCAGGCC AACTCCGAGC ACTGCCGCCA CAAGATCTTC
AACGCCAGTT GGGATATCGA CGGCCAGGCC CAGGAAAAAA GCCTGTTCGG CATGATCAAG
AACACCTACC AGATGCACAA CGAAGGTGTG CTGTCGGCGT ACAAGGACAA CGCCTCGGTG
ATCGTCGGCA ACGTTGCCGG CCGCTTCTTC CCGAACCCTG AAACCCGCCA GTACGGCGCG
GTGCAGGAGC CGGTGCACAT CCTGATGAAG GTGGAAACGC ACAACCACCC GACCGCCATC
GCCCCGTTCT CCGGCGCCTC CACCGGCTCC GGTGGCGAAA TCCGCGACGA AGGTGCGACC
GGCCGTGGCG CCAAGCCCAA GGCCGGCCTG ACCGGCTTCA CCGTGTCCAA CCTGCGCATT
CCGGGCTTCG AGCAGCCGTG GGAGCAGGCC TATGGCAAGC CCGAGCGTAT CGTCGACGCC
CTCGACATCA TGATCGAAGG CCCTCTTGGC GGCGCTGCGT TCAACAACGA ATTCGGCCGC
CCGGCCCTGA CCGGTTACTT CCGTACCTTC GAGCAAGCCA TCAACACCCC GCACGGTGAA
GAAGTGCGCG GCTACCACAA GCCGATCATG CTCGCCGGCG GTATGGGCAA CATCCGTGAA
GACCACGTGC AGAAGGGCGA AATCACTGTC GGCGCCAAGC TGATCGTGCT CGGTGGCCCG
GCCATGCTGA TCGGCCTGGG CGGCGGCGCT GCTTCGTCGG TGGCTACCGG TGCCAGCTCG
GCTGACCTGG ATTTCGCTTC GGTACAGCGC GAAAACCCGG AAATGGAGCG CCGTTGCCAG
GAGGTCATCG ACCGTTGCTG GCAGCTGGGC GACAACAACC CGATCGCCTT CATCCACGAC
GTGGGCGCTG GCGGTATTTC CAATGCCTTC CCTGAGCTGG TCAACGACGG TGGCCGCGGT
GGCCGCTTCG AGCTGCGCAA CGTGCCCAAC GACGAGCCGG GCATGGCCCC GCACGAAATC
TGGAGCAACG AATCGCAAGA GCGTTACGTG CTGGCCGTCA GCGCGGTCGA CTTCGAGCGT
TTCAAGGCCA TCTGCGAGCG CGAACGTTGC CCGTTTGCCG TGGTGGGTGA AGCCACTGAA
GAACCGCACC TGACCGTCAG CGACAGCCAC TTCGGCAACA CCCCGGTGGA CATGCCGCTG
GACGTGCTGC TGGGCAAGCC GCCGCGCATG CACCGTTCGG TTACCCGCGA AGCCGAGCTG
GGCGATGACT TCGACCCGAG CGAACTGGAC CTGGACAGCG CCGTCCAGCG CGTGCTGAAC
CACCCGGCCG TGGCCAGCAA GAGCTTCCTG ATCACCATTG GCGACCGCAC CATCACCGGC
CTGGTTGCCC GTGACCAGAT GGTCGGCCCG TGGCAGGTTC CGGTGGCTGA CTGCGCCGTT
ACCGCCACCA GCTTCGACGT CTACACCGGT GAAGCCATGG CCATGGGCGA GCGTACGCCG
CTGGCGCTGC TGGATGCCCC GGCGTCCGGC CGCATGGCCA TCGGCGAAAC CCTGACCAAC
CTGGCGGCTT CGCGCATCGA AAAGCTGTCC GACATCAAAC TGTCGGCCAA CTGGATGTCC
GCGGCTGGTC ACCCAGGTGA AGACGCACGC CTGTACGACA CCGTGAAGGC TGTCGGCATG
GAGCTGTGCC CGGAGCTGGG CATCACCATT CCGGTCGGCA AAGACTCGAT GTCGATGAAG
ACCAAGTGGA GCGACGAGGG CGTCGAGAAG AGCGTCACCT CGCCGATGTC GCTGATCATC
ACCGGCTTCG CCCCGGTCAC CGACATCCGC AAGACCCTGA CCCCGCAACT GCGCATGGAC
AAGGGCGAGA CCGACCTGAT CCTGATCGAC CTGGGCCGCG GCAAGAACCG CATGGGCGCC
TCGATCCTGG CCCAGACCTA CGGCAAGATC GCTGCGCAGG CACCGGACGT CGACGACGCC
GAAGACCTCA AGGCCTTCTT CGCCGTGATC CAGGGCCTGA ACGCCGACGG CCACCTGCTG
GCCTACCACG ACCGTTCCGA CGGCGGCCTG GTTACCACCG TGCTGGAAAT GGCCTTCGCC
GGCCACTGCG GCCTCGACCT GCAACTCGAC CCGCTGACCG ACAGCAAGGG CGAAGTGCCG
GCCATCCTCT TCAATGAGGA GCTGGGTGCG GTGATCCAGG TTCGCCAGGA CGCTACCCCG
GACGTGCTGG CTCAGTTCAG CGCTGCTGGC CTGGGTGAAG AGTGCGTCGC GGTGATCGGC
AAGCCAGTCA ACAACGCTGA AGTGACCATC AGCCTGAACG GCGAAGTGCT GTTCGACGAT
GACCGTCGCA TGCTGCAGCG CCAGTGGGCT GAAACCAGCT ACCAGATCCA GCGCCTGCGC
GACAACGCCG ACTGCGCTGA CCAGGAGTTC GACCTGCTGC TCGAGGAAGA CAACCCGGGT
CTGTCGGTGA AGCTGGGCTT CGACGTCAAC GACGACATCG CGGCGCCTTA CATCAAGAAA
GGCGTGCGCC CGCAAGTGGC CATCCTGCGC GAGCAGGGTG TCAACGGCCA GGTCGAGATG
GCTGCTGCCT TCGACCGCGC CGGCTTCGCC GCCATCGACG TGCACATGAG CGATATTCTC
GCTGGCCGTG TCGACTTCGA AGCCTTCAAG GGCCTGGTCG CCTGTGGCGG CTTCTCGTAC
GGTGACGTGC TGGGCGCTGG CGAAGGCTGG GCCAAGTCGG CGCTGTTCAA CGCCCGTGCC
CGTGACGCCT TCCAGGCCTT CTTCGAGCGT ACCGACAGCT TCGCCCTGGG CGTGTGCAAC
GGTTGCCAGA TGATGTCCAA CCTGCACGAG CTGATCCCGG GCACCGAGTA CTGGCCGCAC
TTCGTGCGCA ACCGCTCGGA GCAATTCGAG GCCCGCGTGG CCATGGTCGA AGTGCAGAAG
TCCAACTCGA TCTTCCTGCA GGGCATGGCC GGTTCGCGCA TGCCGATCGC CATTGCCCAC
GGCGAAGGCC ATGCCGAGTT CGCCAGCGAA GAAGCATTGC TGGAAGCCGA TGTGTCCGGT
TGCGTGGCCC TGCGCTACGT CGACAACCAC GGCAAGGTCA CCGAAGCTTA CCCGGCCAAC
CCGAACGGCT CGCCACGTGG CATCACTGGC CTGACCAGCC GCGACGGCCG CGTGACCATC
ATGATGCCGC ACCCGGAGCG TGTGTTCCGC GCTGTGCAGA ACTCCTGGCG CCCGGACGAG
TGGCAGGAAG ATGCCGCGCT GATGCGTATG TTCCGCAACG CGCGGGTGTG GGTGAACTAA
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| Protein sequence | MLILRGAPAL SAFRHGKLLE QLSQKVPAVT GLYAEFAHFA DVDGELTADQ QQVLGRLLKY
GPSVPVQEPT GRLFLVVPRL GTISPWASKA SDIAHNCGLQ SIQRLERGIA YYVAGTLSDA
DAALIAAELH DRMTQRVLSQ LEQAADLFSH AQPKPMTSVD ILAGGRDALA KANIDLGLAL
AEDEIDYLVN AFQGLKRNPN DIELMMFAQA NSEHCRHKIF NASWDIDGQA QEKSLFGMIK
NTYQMHNEGV LSAYKDNASV IVGNVAGRFF PNPETRQYGA VQEPVHILMK VETHNHPTAI
APFSGASTGS GGEIRDEGAT GRGAKPKAGL TGFTVSNLRI PGFEQPWEQA YGKPERIVDA
LDIMIEGPLG GAAFNNEFGR PALTGYFRTF EQAINTPHGE EVRGYHKPIM LAGGMGNIRE
DHVQKGEITV GAKLIVLGGP AMLIGLGGGA ASSVATGASS ADLDFASVQR ENPEMERRCQ
EVIDRCWQLG DNNPIAFIHD VGAGGISNAF PELVNDGGRG GRFELRNVPN DEPGMAPHEI
WSNESQERYV LAVSAVDFER FKAICERERC PFAVVGEATE EPHLTVSDSH FGNTPVDMPL
DVLLGKPPRM HRSVTREAEL GDDFDPSELD LDSAVQRVLN HPAVASKSFL ITIGDRTITG
LVARDQMVGP WQVPVADCAV TATSFDVYTG EAMAMGERTP LALLDAPASG RMAIGETLTN
LAASRIEKLS DIKLSANWMS AAGHPGEDAR LYDTVKAVGM ELCPELGITI PVGKDSMSMK
TKWSDEGVEK SVTSPMSLII TGFAPVTDIR KTLTPQLRMD KGETDLILID LGRGKNRMGA
SILAQTYGKI AAQAPDVDDA EDLKAFFAVI QGLNADGHLL AYHDRSDGGL VTTVLEMAFA
GHCGLDLQLD PLTDSKGEVP AILFNEELGA VIQVRQDATP DVLAQFSAAG LGEECVAVIG
KPVNNAEVTI SLNGEVLFDD DRRMLQRQWA ETSYQIQRLR DNADCADQEF DLLLEEDNPG
LSVKLGFDVN DDIAAPYIKK GVRPQVAILR EQGVNGQVEM AAAFDRAGFA AIDVHMSDIL
AGRVDFEAFK GLVACGGFSY GDVLGAGEGW AKSALFNARA RDAFQAFFER TDSFALGVCN
GCQMMSNLHE LIPGTEYWPH FVRNRSEQFE ARVAMVEVQK SNSIFLQGMA GSRMPIAIAH
GEGHAEFASE EALLEADVSG CVALRYVDNH GKVTEAYPAN PNGSPRGITG LTSRDGRVTI
MMPHPERVFR AVQNSWRPDE WQEDAALMRM FRNARVWVN
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