| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1043 |
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| Symbol | |
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| ID | 5191617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1170649 |
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| End bp | 1173237 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585501 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_001266388 |
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| Protein GI | 148546286 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.261279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG GTCCTACCCG CTCGTCCAAC CTTCCCCGCC GTACAGGACA ACTGTCCCTG
TTGACCCTTG CTCTGCTCGC CAGCGGCGCC TGCAGCCTGC CGGCGCTGGC CGCCGAGCCG
GCCCAGGCCA GCAGCCCGCG CATGGGCGAC TACCGCTTCA GCATCGGCCA GCAGCCGCTG
GTGTCGGCGA TCAACGCCTT CAGCCAGGTC ACCGGCTGGC AGGTCGGCTT CAGCGCCGAG
CTGGCCGACG GCGTGGCTTC GCCAGGCGTA CAAGGTTCGC TGCCGCCAGA TGCTGCCCTC
AAGCGCCTGT TGCGGGGCAC CGGGCTGAGC TTTCGCAAGA TCAGCAACGG CAATGTGGTA
CTGGAGCGCC AAACCGCAAG CAACGTGATC GCCCTGCAGC AGGTGACCGT CAGCGCCACC
CGCAGCGCAC AGGACGTCAG CCAGGTACCC AGCACTGTCA GTGTGCAGAC CCGTGAGCAA
CTGGACCGGC AGAACGTGAA CAATATCCAG GATCTGGTGC GCTACGAGCC GGGGGTGTCG
GTATCCGGAA CCGGCCAACG CAGCGGGCTG AACGGCTACA ACATCCGTGG TATCGACGGC
GAGCGGATCC TCACCCAGGT CGACGGCGTG TCGATCCCCG ACAGCTTCTT CTACGGCCCT
TACGCCCAGA CCCAGCGCAA TTACGTCGAC CCGGAAATCG TCAAGCGCGT GGAAATCCTC
CGCGGCCCGG CCTCGGTGTT GTATGGCAGC AACGCCATCG GCGGTGCGGT GAGCTACTTT
ACCCTCGACC CGGACGACAT CATCAAGCCC GGTAAAGACG TGGGTGCACG CCTGAAAACC
GGCTACAGCT CGGCTGACGA AAGCTGGCTG ACCTCCGCCA CCGTCGCCGG CCGCCAGGGT
GATTTCGACG GCCTGCTGCA CCTGAGCCAG CGCAACGGCC ACGAGACCGA AACCCACGGC
AGCCACAGTG GCGACGGCCT GTCGCGTACC GAAGCCAACC CGATGGACGT GCGCACCACC
AACGTGCTGG CCAAGCTGGG CTGGAACTAC GCCGACGACG CGCGCCTGGG GTTCACCTAC
GAGCGCTACA AAGATGACCG CGACCAGAAC ATCCTCAGCG CGGTGGGTGG GCCGTTCATC
CCCGGCTTTG GTGGCATGGG CTACTACAAG GCGCGTAATG GCAACGACAC CATCACCCGC
GAGCGCTTCG GCATTAACCA TGAGTTCGGC CTGGACTCGC TGGTCGCCGA CCACGTCAAG
TGGAGCCTGA ACTACCAGAT TGCCAAGACC GACCAGCACA CCGAGGAAGT TTACGTGCCG
CCTGGCCGCC AAGTGCTGCG CACCCGCGAT ACCACCTACA AGGACCGCCA GTGGGTGTTC
GACGCCCAGC TGGACAAAGC CTTCAGCATC GGCGCCACCG ACCACCTGCT GACCTACGGC
ACAACGCTCA AGCACGAAAA GGTCACCGGT TCGCGCAGCG GTACCGGTAC CTGCTTGACC
GTAGGATCCG GTTGTTCCGC CGCCGGCGCC GAACGCCCGG CAGACGGCCA GGTTCTGGTC
AGCGACTTCC CGGACCCGAC CGTGAATACC TACAGCCTGT TCGCGCAGGA TGAAATCCGC
TGGAACAACT GGACCTTCAT GCCCGGCGCG CGCTACGACT ACACCCGTAT GGAGCCCAAA
TTCACCGAGG CATTCCTGCG TGGCCTGGAG TCCAGCGGTA CGGCGCCTAC CTCCCAGGAC
GATTCGGACA AGAAGTGGCA CCGCGTCTCG CCCAAGTTCG GCCTGACCTA CGCCTTCAAC
GACAATTACA CCTGGTACGG CCAATATGCA GAGGGCTTCC GCACGCCGAC CGCCAAAGCC
ATGTATGGCC GCTTCCAGAA CCTGGACCAA GGCTACCGCG TGGAGGGCAA CCCGAACCTT
GAGCCTGAAA AGAGCAAAAG CTACGAAACC GGCCTGCGAG GCAACTTCGA CGCCGGCAAC
TTCGACGTGG CAGTGTTCTA CAACAAGTAC CGTGATTTCA TCGACGAAGA TGCCGTGCAA
AGCGCCAACC TGGAACAGAC CTTCCAGGCC AACAACATCA AGCACGCCAC CATCAAGGGT
GCCGAATTCA AGGGCCGCCT GAACCTCGAC CACTTCGGCG CACCGCAGGG GCTCTATACC
CAAACCTCGA TTGCCTACAC CTATGGTCGT AACGATGACA CCGGTCAACC GCTGAACAGT
GTCAACCCGC TCAAAGGCGT ATTCGGCCTG GGCTACGAGC AGCAGAACTA CGGTGGCTTG
CTGAGCTGGA CGCTGGTCAA GCGCAAGACC CGTGTCGACG ACAGCACGTT TTATTCGCCT
GACGGTTCTA CCTCGAAGTT CCGCACCCCG GGCTACGGTG TGCTGGACCT GACCGGCTAC
TACAAGGTCA CCGACGACGT CACCATCAAC GCCGGGCTGT ACAACCTTAC CGACAAGAAG
TACTGGCAGT GGGATTCGGT GCGCAGCTAC GACGGCCAGG GTGAGGCGGC TGTGACCCAG
CCAGCCAACA TCGACCGCCT GACCATGCCG GGGCGCAATT TCGGTATCAA TGTGGTTTGG
GATATCTGA
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| Protein sequence | MSTGPTRSSN LPRRTGQLSL LTLALLASGA CSLPALAAEP AQASSPRMGD YRFSIGQQPL
VSAINAFSQV TGWQVGFSAE LADGVASPGV QGSLPPDAAL KRLLRGTGLS FRKISNGNVV
LERQTASNVI ALQQVTVSAT RSAQDVSQVP STVSVQTREQ LDRQNVNNIQ DLVRYEPGVS
VSGTGQRSGL NGYNIRGIDG ERILTQVDGV SIPDSFFYGP YAQTQRNYVD PEIVKRVEIL
RGPASVLYGS NAIGGAVSYF TLDPDDIIKP GKDVGARLKT GYSSADESWL TSATVAGRQG
DFDGLLHLSQ RNGHETETHG SHSGDGLSRT EANPMDVRTT NVLAKLGWNY ADDARLGFTY
ERYKDDRDQN ILSAVGGPFI PGFGGMGYYK ARNGNDTITR ERFGINHEFG LDSLVADHVK
WSLNYQIAKT DQHTEEVYVP PGRQVLRTRD TTYKDRQWVF DAQLDKAFSI GATDHLLTYG
TTLKHEKVTG SRSGTGTCLT VGSGCSAAGA ERPADGQVLV SDFPDPTVNT YSLFAQDEIR
WNNWTFMPGA RYDYTRMEPK FTEAFLRGLE SSGTAPTSQD DSDKKWHRVS PKFGLTYAFN
DNYTWYGQYA EGFRTPTAKA MYGRFQNLDQ GYRVEGNPNL EPEKSKSYET GLRGNFDAGN
FDVAVFYNKY RDFIDEDAVQ SANLEQTFQA NNIKHATIKG AEFKGRLNLD HFGAPQGLYT
QTSIAYTYGR NDDTGQPLNS VNPLKGVFGL GYEQQNYGGL LSWTLVKRKT RVDDSTFYSP
DGSTSKFRTP GYGVLDLTGY YKVTDDVTIN AGLYNLTDKK YWQWDSVRSY DGQGEAAVTQ
PANIDRLTMP GRNFGINVVW DI
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