Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1038 |
Symbol | |
ID | 5193084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1164808 |
End bp | 1166061 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585496 |
Product | arginine deiminase |
Protein accession | YP_001266383 |
Protein GI | 148546281 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2235] Arginine deiminase |
TIGRFAM ID | [TIGR01078] arginine deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.584278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTG AAAAACAGAA GTACGGTGTC CACTCCGAAG CCGGCAAACT GCGCAAAGTG ATGGTTTGCG CACCGGGCCT GGCGCACAAG CGCCTGACGC CGAGCAACTG TGACGAACTG CTGTTCGACG ATGTGATCTG GGTCGACCAG GCCAAGCGTG ACCATTTCGA CTTCGTCACC AAGATGCGCG AGCGTGGCGT GGATGTGCTG GAGATGCACA ACCTGCTAAC CGATATCGTG CAGAACAAAG AGGCGCTCAA GTGGATCCTC GACCGCAAGA TCACCCCTGA CACCGTCGGC GTAGGCCTGA CCAACGAAGT GCGCAGCTGG CTCGAAGGCC TGGAGCCACG CCACCTGGCC GAATTCCTGA TCGGCGGCGT GGCAGGCCAG GACCTGCCGC AGAGCGAAGG CGCCGAAGTC GTGAAGATGT ACAACGACTA CCTGGGCCAC TCCAGCTTCA TCCTGCCACC CCTGCCCAAC ACCCAGTTCA CCCGCGACAC CACCTGCTGG ATCTACGGCG GCGTGACGTT GAACCCGATG TACTGGCCGG CGCGTCGCCA GGAAACCCTG TTGACCACCG CCATCTACAA GTTCCACAAG GCGTTCACCG AGGCCGACTT CCAGGTGTGG TATGGCGACC CGGACAAGGA CCATGGCAAT GCCACCCTCG AAGGCGGTGA TGTGATGCCG ATCGGCAATG GCATCGTGCT CATCGGCATG GGTGAGCGCA CCTCGCGCCA GGCCATCGGC CAGCTCGCGC AAAACCTGTT CGCCAAGGGC GCCGTCAAGG AAGTGATCGT CGCCGGCCTG CCAAAGTCCC GCGCCGCCAT GCACCTGGAC ACTGTCTTCA GCTTCTGCGA CCGCGACCTG GTCACGGTCT TCCCGGAAGT GGTGAAAGAG ATTGTGCCAT TCATCATCCG CCCGGACGAA AGCAAGCCTT ACGGAATGGA TGTACGCCGC ATCAACAAGT CGTTCATCGA AGTGGTGGGC GAGCAACTGG GTGTCAAGCT GCGCGTGGTC GAGACCGGCG GCAACAGCTT CGCCGCCGAA CGCGAACAGT GGGATGACGG TAACAACGTG GTGGCCATCG AGCCGGGCGT GGTCATTGGC TACGACCGCA ACACCTACAC CAACACCCTG CTGCGCAAGG CGGGCATCGA GGTCATCACC ATCAGCGCCG GCGAACTGGG CCGGGGCCGT GGCGGCGGCC ACTGCATGAC CTGCCCTATC GTGCGCGACC CGATCGACTA CTAA
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Protein sequence | MSAEKQKYGV HSEAGKLRKV MVCAPGLAHK RLTPSNCDEL LFDDVIWVDQ AKRDHFDFVT KMRERGVDVL EMHNLLTDIV QNKEALKWIL DRKITPDTVG VGLTNEVRSW LEGLEPRHLA EFLIGGVAGQ DLPQSEGAEV VKMYNDYLGH SSFILPPLPN TQFTRDTTCW IYGGVTLNPM YWPARRQETL LTTAIYKFHK AFTEADFQVW YGDPDKDHGN ATLEGGDVMP IGNGIVLIGM GERTSRQAIG QLAQNLFAKG AVKEVIVAGL PKSRAAMHLD TVFSFCDRDL VTVFPEVVKE IVPFIIRPDE SKPYGMDVRR INKSFIEVVG EQLGVKLRVV ETGGNSFAAE REQWDDGNNV VAIEPGVVIG YDRNTYTNTL LRKAGIEVIT ISAGELGRGR GGGHCMTCPI VRDPIDY
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