Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1017 |
Symbol | |
ID | 5194166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1143399 |
End bp | 1143827 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585475 |
Product | DNA polymerase III subunit chi |
Protein accession | YP_001266362 |
Protein GI | 148546260 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG TCGACTTCTA CATTCTGCCC ACCGACTCGC TGTCGGCGCG GCTCGATTTC GCCTGCAAGC TGTGCGAGAA GGCCTGGCGC CTCGGCCACC GGGTCTATCT GCACTGCCAG GATGCAGAAC AGCGCAGTGA ACTGGACCAA CGCTTGTGGC GCTTCAAGGG CGAGGCCTTC GTGCCCCACG ACCTCGCCGA GGTGCATGCC GATGCTGACG TGGTTCTGGG CCTGGCTGAC AACGCCGGCG AGCACCACGG CCTGCTGATC AACCTCGGCG CCAGCGTGCC GGGCTTTGTC GGGCAGTTCG AGCGGGTGGC CGAAATCGTT GTTGAAGAGC CGGCTATCCG CCAATCAGCC CGTGAGCGAT TCCGTTTCTA CCGTGAACAG GGCTATGCTC TGCAAGACCA CCGCTTACAG CGACTTTGA
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Protein sequence | MSKVDFYILP TDSLSARLDF ACKLCEKAWR LGHRVYLHCQ DAEQRSELDQ RLWRFKGEAF VPHDLAEVHA DADVVLGLAD NAGEHHGLLI NLGASVPGFV GQFERVAEIV VEEPAIRQSA RERFRFYREQ GYALQDHRLQ RL
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