Gene Pput_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1017 
Symbol 
ID5194166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1143399 
End bp1143827 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID640585475 
ProductDNA polymerase III subunit chi 
Protein accessionYP_001266362 
Protein GI148546260 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG TCGACTTCTA CATTCTGCCC ACCGACTCGC TGTCGGCGCG GCTCGATTTC 
GCCTGCAAGC TGTGCGAGAA GGCCTGGCGC CTCGGCCACC GGGTCTATCT GCACTGCCAG
GATGCAGAAC AGCGCAGTGA ACTGGACCAA CGCTTGTGGC GCTTCAAGGG CGAGGCCTTC
GTGCCCCACG ACCTCGCCGA GGTGCATGCC GATGCTGACG TGGTTCTGGG CCTGGCTGAC
AACGCCGGCG AGCACCACGG CCTGCTGATC AACCTCGGCG CCAGCGTGCC GGGCTTTGTC
GGGCAGTTCG AGCGGGTGGC CGAAATCGTT GTTGAAGAGC CGGCTATCCG CCAATCAGCC
CGTGAGCGAT TCCGTTTCTA CCGTGAACAG GGCTATGCTC TGCAAGACCA CCGCTTACAG
CGACTTTGA
 
Protein sequence
MSKVDFYILP TDSLSARLDF ACKLCEKAWR LGHRVYLHCQ DAEQRSELDQ RLWRFKGEAF 
VPHDLAEVHA DADVVLGLAD NAGEHHGLLI NLGASVPGFV GQFERVAEIV VEEPAIRQSA
RERFRFYREQ GYALQDHRLQ RL