Gene Pput_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0997 
Symbol 
ID5190775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1124397 
End bp1125206 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID640585455 
ProductABC transporter related 
Protein accessionYP_001266342 
Protein GI148546240 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGG ATAGCGCCTA CGCGGTCGAG TTGAAGGGTG TAACCTTCAA ACGTGGTTCG 
CGCAGCATTT TCAGCAACGT GGACATCAGC ATCCCGCGCG GCAAGGTCAC CGGCATCATG
GGGCCATCGG GGTGCGGCAA GACCACGTTG CTCCGCCTGA TGGGCGCACA GCTGCGCCCC
GCGAGCGGTG AGGTATGGGT TGCCGGGCAG AACCTGCCGA CGCTGTCGCG CAGCGACCTG
TTCGACGCCC GCAAGCAGAT GGGCGTGCTG TTCCAGAGCG GCGCGTTGTT CACCGACCTC
GATGTGTTCG AGAACGTCGC GTTCCCGCTG CGCGTGCATA CTCAGCTGTC GGACGAAATG
ATCCGTGACA TCGTGTTGAT GAAGCTGCAG GCCGTGGGCC TGCGCGGTGC CATCGACCTG
ATGCCCGACG AGCTGTCCGG TGGCATGAAG CGCCGTGTGG CACTGGCCCG GGCGATTGCC
CTGGACCCGC AGATCCTCAT GTACGACGAA CCGTTCGTCG GCCAGGACCC GATCGCCATG
GGGGTACTGG TGCGCCTGAT TCGCCTGCTC AACGATGCCC TGGGCATCAC CAGCATCGTG
GTTTCCCATG ACCTGGCAGA AACCGCCAGC ATCGCCGACT ACATTTACGT GGTAGGTGAC
GGCCAAGTGC TGGGCCAGGG GACGCCTGAT GAGCTGATGG GTTCGGAAAA TCCACGGATC
CGCCAATTCA TGAAAGGCGA CCCGGATGGC CCGGTTCCCT TCCACTTTCC CGCGCCTGAC
TACCGCGCCG ACCTGCTGGG GGCGCGTTGA
 
Protein sequence
MSVDSAYAVE LKGVTFKRGS RSIFSNVDIS IPRGKVTGIM GPSGCGKTTL LRLMGAQLRP 
ASGEVWVAGQ NLPTLSRSDL FDARKQMGVL FQSGALFTDL DVFENVAFPL RVHTQLSDEM
IRDIVLMKLQ AVGLRGAIDL MPDELSGGMK RRVALARAIA LDPQILMYDE PFVGQDPIAM
GVLVRLIRLL NDALGITSIV VSHDLAETAS IADYIYVVGD GQVLGQGTPD ELMGSENPRI
RQFMKGDPDG PVPFHFPAPD YRADLLGAR