Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0997 |
Symbol | |
ID | 5190775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1124397 |
End bp | 1125206 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585455 |
Product | ABC transporter related |
Protein accession | YP_001266342 |
Protein GI | 148546240 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGG ATAGCGCCTA CGCGGTCGAG TTGAAGGGTG TAACCTTCAA ACGTGGTTCG CGCAGCATTT TCAGCAACGT GGACATCAGC ATCCCGCGCG GCAAGGTCAC CGGCATCATG GGGCCATCGG GGTGCGGCAA GACCACGTTG CTCCGCCTGA TGGGCGCACA GCTGCGCCCC GCGAGCGGTG AGGTATGGGT TGCCGGGCAG AACCTGCCGA CGCTGTCGCG CAGCGACCTG TTCGACGCCC GCAAGCAGAT GGGCGTGCTG TTCCAGAGCG GCGCGTTGTT CACCGACCTC GATGTGTTCG AGAACGTCGC GTTCCCGCTG CGCGTGCATA CTCAGCTGTC GGACGAAATG ATCCGTGACA TCGTGTTGAT GAAGCTGCAG GCCGTGGGCC TGCGCGGTGC CATCGACCTG ATGCCCGACG AGCTGTCCGG TGGCATGAAG CGCCGTGTGG CACTGGCCCG GGCGATTGCC CTGGACCCGC AGATCCTCAT GTACGACGAA CCGTTCGTCG GCCAGGACCC GATCGCCATG GGGGTACTGG TGCGCCTGAT TCGCCTGCTC AACGATGCCC TGGGCATCAC CAGCATCGTG GTTTCCCATG ACCTGGCAGA AACCGCCAGC ATCGCCGACT ACATTTACGT GGTAGGTGAC GGCCAAGTGC TGGGCCAGGG GACGCCTGAT GAGCTGATGG GTTCGGAAAA TCCACGGATC CGCCAATTCA TGAAAGGCGA CCCGGATGGC CCGGTTCCCT TCCACTTTCC CGCGCCTGAC TACCGCGCCG ACCTGCTGGG GGCGCGTTGA
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Protein sequence | MSVDSAYAVE LKGVTFKRGS RSIFSNVDIS IPRGKVTGIM GPSGCGKTTL LRLMGAQLRP ASGEVWVAGQ NLPTLSRSDL FDARKQMGVL FQSGALFTDL DVFENVAFPL RVHTQLSDEM IRDIVLMKLQ AVGLRGAIDL MPDELSGGMK RRVALARAIA LDPQILMYDE PFVGQDPIAM GVLVRLIRLL NDALGITSIV VSHDLAETAS IADYIYVVGD GQVLGQGTPD ELMGSENPRI RQFMKGDPDG PVPFHFPAPD YRADLLGAR
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