Gene Pput_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0993 
Symbol 
ID5192309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1121545 
End bp1122069 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID640585451 
Productcell envelope biogenesis YhbN 
Protein accessionYP_001266338 
Protein GI148546236 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTCG TTAAAACCCT CCCCCTTTTG CTCAGCCTGA GCGCAGCACT GGGAAGCGCG 
AGCGCCCTCG CCCTGCCGAA CGACCGTGAC CAGCCTATCC GCATCCAGGC CGACAACGCT
CACCTGGATG ACAAACAAGG CGTGGCCACT TACACCGGCG ACGTGATCAT CACTCAGGGT
TCGATGATGA TCAAAGGCAA CACCGTGACC ATTACCCGCT CCGCCTCTGG CGATATCGAC
GTAGTGACCT CGGTGGGCAA CCTGGCCTAC TTCGAGCAGC AGCAGAGCGC AGCCAAGCCG
GACAAGATGA AAGGCTGGGG CGTAACCATC CAGTACCAGT CGCAGAAGGA CTTGGTCATT
CTCACCGACC GCGCCAAGGT CGAGAGCGAA GGCAATACCA CCGAAGGCGA AAAGATCGTC
TACAACACTC AGACCCAGGT GGCGACCGCC GGCCGTGGTG GCAATGTGAC AACACCCCGT
CAGCGCATCG ACATGGTGAT CCAGCCCAAG AAGAAGGCCG AGTAA
 
Protein sequence
MRLVKTLPLL LSLSAALGSA SALALPNDRD QPIRIQADNA HLDDKQGVAT YTGDVIITQG 
SMMIKGNTVT ITRSASGDID VVTSVGNLAY FEQQQSAAKP DKMKGWGVTI QYQSQKDLVI
LTDRAKVESE GNTTEGEKIV YNTQTQVATA GRGGNVTTPR QRIDMVIQPK KKAE