Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0993 |
Symbol | |
ID | 5192309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1121545 |
End bp | 1122069 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640585451 |
Product | cell envelope biogenesis YhbN |
Protein accession | YP_001266338 |
Protein GI | 148546236 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTCG TTAAAACCCT CCCCCTTTTG CTCAGCCTGA GCGCAGCACT GGGAAGCGCG AGCGCCCTCG CCCTGCCGAA CGACCGTGAC CAGCCTATCC GCATCCAGGC CGACAACGCT CACCTGGATG ACAAACAAGG CGTGGCCACT TACACCGGCG ACGTGATCAT CACTCAGGGT TCGATGATGA TCAAAGGCAA CACCGTGACC ATTACCCGCT CCGCCTCTGG CGATATCGAC GTAGTGACCT CGGTGGGCAA CCTGGCCTAC TTCGAGCAGC AGCAGAGCGC AGCCAAGCCG GACAAGATGA AAGGCTGGGG CGTAACCATC CAGTACCAGT CGCAGAAGGA CTTGGTCATT CTCACCGACC GCGCCAAGGT CGAGAGCGAA GGCAATACCA CCGAAGGCGA AAAGATCGTC TACAACACTC AGACCCAGGT GGCGACCGCC GGCCGTGGTG GCAATGTGAC AACACCCCGT CAGCGCATCG ACATGGTGAT CCAGCCCAAG AAGAAGGCCG AGTAA
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Protein sequence | MRLVKTLPLL LSLSAALGSA SALALPNDRD QPIRIQADNA HLDDKQGVAT YTGDVIITQG SMMIKGNTVT ITRSASGDID VVTSVGNLAY FEQQQSAAKP DKMKGWGVTI QYQSQKDLVI LTDRAKVESE GNTTEGEKIV YNTQTQVATA GRGGNVTTPR QRIDMVIQPK KKAE
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