| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0992 |
|---|
| Symbol | |
|---|
| ID | 5192308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1120819 |
|---|
| End bp | 1121544 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640585450 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001266337 |
|---|
| Protein GI | 148546235 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC TCAAAGCCCA GCACCTGGCA AAGAGCTACA AGGGGCGGCA GGTAGTACGT
GATGTCAGCC TGTCTATCGA CAGCGGCCAG ATCGTCGGCC TGCTCGGCCC CAACGGCGCC
GGCAAGACCA CCTGCTTCTA CATGATTGTC GGGCTGGTCC AGGCCGAACA GGGCCGCGTA
CTGATCGACA ACCTCGATGT CAGCCACCAG CCCATGCACG GCCGCGCTCG CGCCGGTATC
GGCTACCTGC CGCAGGAAGC CTCGATCTTC CGCAAGCTGT CGGTCGCCGA CAACATCATG
GCCATCCTCG AGACCCGCAA GGACCTCGAC CGGGACGGCC GTCGCAAAGA GCTGGAAAGC
CTGCTGCAGG AGTTCCACAT CAGCCACATC CGGGACAACC TCGGCATGAG CCTGTCCGGT
GGTGAACGCC GCCGCGTCGA AATTGCACGC GCCCTGGCGA CCGCACCCAA GTTCATCCTG
CTGGACGAAC CGTTCGCCGG TGTCGACCCG ATTTCGGTCG GCGACATCAA GCAGATCATC
CACCACCTCA AGGCCAAAGG TATCGGCGTA CTGATTACCG ACCACAACGT GCGTGAAACC
CTGGATATCT GCGAAACCGC TTATATCGTC AACGATGGCC GACTGATCGC CGAAGGCGAC
GCTGAAACCA TCCTGGCAAA CGACTTGGTC AAAGAAGTTT ACCTGGGTCA CGAGTTCCGC
CTCTGA
|
|---|
| Protein sequence | MATLKAQHLA KSYKGRQVVR DVSLSIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQAEQGRV
LIDNLDVSHQ PMHGRARAGI GYLPQEASIF RKLSVADNIM AILETRKDLD RDGRRKELES
LLQEFHISHI RDNLGMSLSG GERRRVEIAR ALATAPKFIL LDEPFAGVDP ISVGDIKQII
HHLKAKGIGV LITDHNVRET LDICETAYIV NDGRLIAEGD AETILANDLV KEVYLGHEFR
L
|
|---|
| |