Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0987 |
Symbol | |
ID | 5192258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1117137 |
End bp | 1117409 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585445 |
Product | phosphotransferase system, phosphocarrier protein HPr |
Protein accession | YP_001266332 |
Protein GI | 148546230 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCC GCGAAATCAC CATCATCAAC AAGCTGGGTC TGCATGCCCG GGCGGCAGCC AAGTTCGTCG GTGTGGCCGG CCGCTTCCCC TGCCAGGTAC GGGTGGGTCG CGCCCCGGAC AAGCTGGTGG ATGGCAAGAG CATCATGGCG GTGATGATGC TGGCGGCAGG CAAAGGCACC CAGGTGCACC TGCATACCGA GGGTGAGCAG GACAACGACG CCATGGATGC ACTGGTCGAA CTGATCAACA ATTTCTTTGA CGAAGGCGAA TAG
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Protein sequence | MPAREITIIN KLGLHARAAA KFVGVAGRFP CQVRVGRAPD KLVDGKSIMA VMMLAAGKGT QVHLHTEGEQ DNDAMDALVE LINNFFDEGE
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