Gene Pput_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0969 
Symbol 
ID5190929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1096027 
End bp1096401 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content65% 
IMG OID640585427 
Productrare lipoprotein A 
Protein accessionYP_001266314 
Protein GI148546212 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.629172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.144178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAAAAC GTTCCCTCGG CACCCTCGCC CTGTTTTCTT TCCTGGCCGG CTGCGCCAGC 
CATGACATCG ACCCGCGCGG CTACGACCAG ACGGGCACCG CTTCCTACTA CGGCTCGCGC
CACCATGGCA AACGCACCGC CAGTGGCGAA CCGTTCAACC AGCACGGCCT TACCGCCGCG
CACCGCAGCC TGCCCTTCGG CACACGTGTA CGGGTGACCA ACATGGCCAA CCAGCGCAGT
GTGGTGGTAC GCATCAACGA CCGTGGCCCG CACACCCGCG GCCGCCTGAT CGACCTGTCT
CGCGCAGCAG CAGAAAAAAT CGGTATGCTC CGTAGCGGAA CAGCGCGCGT GCGCGTACAA
GGGCTTAGCG ACTGA
 
Protein sequence
MLKRSLGTLA LFSFLAGCAS HDIDPRGYDQ TGTASYYGSR HHGKRTASGE PFNQHGLTAA 
HRSLPFGTRV RVTNMANQRS VVVRINDRGP HTRGRLIDLS RAAAEKIGML RSGTARVRVQ
GLSD