Gene Pput_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0956 
Symbol 
ID5190327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1084447 
End bp1085337 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID640585414 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_001266301 
Protein GI148546199 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.480683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.474013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT ACAAGCTGCT GGCTGCCCTC GCGGCAGTGA TCGAACAAGG CGGTTTCGAG 
CGTGCGGCGC AGGTGCTGGG CTTGTCGCAA TCGGCCATTT CCCAGCGCAT CAAGTTGCTT
GAGGCGCGGG TCGGCCAGCC GGTGCTGGTA CGTGCCTCGC CGCCCGGCAC GACCGAAGTC
GGTCGGCAGC TACTCAACCA TGTGCAGCAG GTGCGCCTGC TTGAACGCGA CCTGCAGCGC
CAGGTACCGG CGCTGGATGA AGAGGGCATG CCGGAGCGCC TGCGTATCGC CCTCAACGCC
GATAGCCTGG CCACCTGGTG GGCCGGCGCG GTGGGCAACT TCTGCGCACA ACAGAACGTG
CTGACCGACC TGGTGGTTGA GGACCAGGAA GTGGGCCTGA AGCGCATGCG TGCCGGCGAA
GTGGCGGCCT GCCTGTGTGG GAGCGAGCGG CCGGTAGCCG GCGCACGCAG TTTGCCACTG
GGGGCCATGC GCTACCGGGC ATTGGCCAGT CCCGTGTTCA TGGCGCGGCA CTTCCCCCAA
GGTTTTGTCG CCAGCCGCCT GGCCCGTACG CCAGCGATCG TGTACGGCCC GGACGATTTC
CTGCAGCATC GCTACCTGGC ATCGCTGGGC ATAGAGGGTG GTTTCCTGCA CCACCTGTGC
CCTTCATCCG AAGGCTTCCT GCGCATGACC GAGGCCGGGT TGGGATGGGG CCTGGTGCCC
GAACTGCAGG CCCGGGAGCA ACTGGCCAGT GGGCAATTGG TGGAAATCTG CCGCGATACC
CCTATCGATG TGCCGCTGTA CTGGCATCAT TGGCGCAATG GCGGGCAATT GCTCGCGCAA
CTGACCGACC ACCTGCGGCA CACCGCACAG CATTGGCTGG TGCCCTTGTA G
 
Protein sequence
MFDYKLLAAL AAVIEQGGFE RAAQVLGLSQ SAISQRIKLL EARVGQPVLV RASPPGTTEV 
GRQLLNHVQQ VRLLERDLQR QVPALDEEGM PERLRIALNA DSLATWWAGA VGNFCAQQNV
LTDLVVEDQE VGLKRMRAGE VAACLCGSER PVAGARSLPL GAMRYRALAS PVFMARHFPQ
GFVASRLART PAIVYGPDDF LQHRYLASLG IEGGFLHHLC PSSEGFLRMT EAGLGWGLVP
ELQAREQLAS GQLVEICRDT PIDVPLYWHH WRNGGQLLAQ LTDHLRHTAQ HWLVPL