| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0906 |
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| Symbol | |
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| ID | 5191466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1031328 |
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| End bp | 1032152 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585365 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001266252 |
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| Protein GI | 148546150 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.472278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTATC CACCCATGAT CGCCACCACC CTCCCCGATG GCCCCGAGCA AACGCCGCTT
ACCGCCGAAA TCGTGCTGCG CTACCACCTC TGCTGGAAGC ACCGCGACCT CGACGGTGTC
ATGGCGCTCT ACCACCCCGA TATCCAGTAC CACGACTTCT TCCAGAACCG CGTGCTCGGC
CACCAGGAAC TGCGCGACTA TGTACGCGCC TGTCTGCCCC ATGAAGCCGG CGAGGACATC
GTCCACAGCG ACCGCATCCG CGTCGATGGC TGCACCGCAT TCATTCAGTA TCAGGTCACG
GTCCAGGGCG GCGACGGCCT GGTTGCGTTC CAGTCCAGCG AGGCGATCAC CGTCAGGGAC
GGGCTGATCT GGCGGGTCAA CGAATACGCC ACGCTGGTCC GCCGGAACGG CACAGGCCAC
GCCAACAGCG GTCCGCGCCC CGCCACCAGC CGCCTGGGCC TGTCGCCTCG GCAGTTGTCG
ACCATGGCCC AGGACCTGGA GCATTACTTC CAGCGTCAAC GCCCCTACCT CGACCCGGAA
CTGGACCTGC AGCAAGTAGC GGAAGCCAGC GGCTACAGCC GCAACCAGAT TTCCTACCTG
CTCAACCAGG TGCTGGGGCA AAGCTTCTAC CGCTACGTCA ACCAGGCACG CCTGCAGCAT
TTGATGGCCA GCCTCGGCGA CGACAGCGTC GAGGCGACGA TCGACGAGCT GGCCTTCAGT
GCCGGCTTCA ACTCGCTGTC GGCGTTCTAC AAGTGCTTCC GTGAGCACAC CGGGCTCACG
CCCAAGGCCT ACCTGAAGCA AATTTCCCTG CGTGCACGCA CGTAA
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| Protein sequence | MHYPPMIATT LPDGPEQTPL TAEIVLRYHL CWKHRDLDGV MALYHPDIQY HDFFQNRVLG
HQELRDYVRA CLPHEAGEDI VHSDRIRVDG CTAFIQYQVT VQGGDGLVAF QSSEAITVRD
GLIWRVNEYA TLVRRNGTGH ANSGPRPATS RLGLSPRQLS TMAQDLEHYF QRQRPYLDPE
LDLQQVAEAS GYSRNQISYL LNQVLGQSFY RYVNQARLQH LMASLGDDSV EATIDELAFS
AGFNSLSAFY KCFREHTGLT PKAYLKQISL RART
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