| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0903 |
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| Symbol | |
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| ID | 5191437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1028350 |
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| End bp | 1029429 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585362 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001266249 |
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| Protein GI | 148546147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.551806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.354887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCT TCCTCCTCGC CCCCCTGATG CTGGCCGCCA GCGTGGCCAG CGCCGCTGAA
ACGGTGAAGA TCTACAACTG GTCCAGCTAC GTGGCCCCCG ATACGTTGAA GAACTTCCAG
CAAGCCAGCG GCATCGTGCC GACCTATGAC GTGTACGACA GCAATGAAAC CCTCGATGGC
AAGTTGATGA CCGGCAATTC CGGCTACGAC GTGGTGTTCC CCTCCAACCA TTTCATGGCC
CGGCAGATCC AGGGCAAGGC CTTGAAGCGC CTGGACAAAT CCCAGCTGCC TAACTGGCAC
AACCTCAACC CGGTGCTGCT CAAGGCGCTG GAGGTGAACG ACCCGGGCAA CCAGTACGGC
TTCCCGTACC TGTGGGGCAG TACCGGTATT GGCTACAACA TCGACAAGGT CAAGGCGGTG
CTCGGCGACA ACGCGCCCGT GGACTCCTGG GACCTGATCT TCAAGCCCGA GTACATGAGC
AAGCTGAAAA GCTGTGGCGT CGCGGTGCTG GACAATGGCC CCGAACTGCT GCCGATCGCC
CTGCACTACC TGGGCTTGCC CCATCACAGC CAAGACCCCA AGGACTACGA GAAGGCCAAG
GACCTGCTGA TGAAAGTGCG GCCTTACATC AGCTATTTCC ACTCGTCCAA GTACACGGGC
GACCTGGCCA ACGGCGATAT CTGCGTGGTA GTGGGGTTCT CAGGGGACGT GCTGCAGGCG
AAGAACCGCG CCGATGAGGC GAACAATGGC GTGAAGGTGG GCTATTCGAT ACCCAAGGAG
GGCGCGCCGA TGTGGTTCGA CATGGTCGCC ATGCCCGTCG ATGCGCCGGA TGAAAAGGCC
GGATATGCCT ACATGAACTA CCTGCTGCAG CCGGAGGTGA TGGCCAACAT CAGCAACCAC
GTCCAGTACG CCAACGGCAA CCTCAAGGCG GACGGGTTGG TGGACCCGGC GATGAAGGGT
AATACGATGA TTTACCCGAG CGACGAGGTG ATGGGCAAGC TGTATGCGCT GGAGGCGATG
CCGGCGAAGA TCGACCGTAT TCGTACGCGA ATCTGGACCA GTATCAAAGC CGGAAATTGA
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| Protein sequence | MRTFLLAPLM LAASVASAAE TVKIYNWSSY VAPDTLKNFQ QASGIVPTYD VYDSNETLDG
KLMTGNSGYD VVFPSNHFMA RQIQGKALKR LDKSQLPNWH NLNPVLLKAL EVNDPGNQYG
FPYLWGSTGI GYNIDKVKAV LGDNAPVDSW DLIFKPEYMS KLKSCGVAVL DNGPELLPIA
LHYLGLPHHS QDPKDYEKAK DLLMKVRPYI SYFHSSKYTG DLANGDICVV VGFSGDVLQA
KNRADEANNG VKVGYSIPKE GAPMWFDMVA MPVDAPDEKA GYAYMNYLLQ PEVMANISNH
VQYANGNLKA DGLVDPAMKG NTMIYPSDEV MGKLYALEAM PAKIDRIRTR IWTSIKAGN
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