| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0894 |
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| Symbol | |
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| ID | 5190563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1016793 |
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| End bp | 1017956 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585353 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001266240 |
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| Protein GI | 148546138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.199626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCC AGGTCGAAGA CTATTTCGCG CGTGAAACCT TCCAGAAAAT GAAGGCGTTC
GCTGACAAGC AGGAAACCCC GTTCGTACTC ATCGACACCC AGATGATCAG CCAGGCGTAC
GACGACCTGC GCGCCGGTTT CGAATTTGCC AAGGTCTACT ACGCGGTCAA GGCCAACCCG
GCCGTGGAAA TCATCGACCT GCTCAAAGAG AAAGGTTCGA GCTTCGACAT CGCCTCGATC
TACGAGCTGG ACAAAGTGAT GGGCCGCGGT GTCAGCGCCG ACCGTATCAG CTACGGCAAC
ACCATCAAGA AGTCCAAGGA CATCCGCTAC TTCTACGAGA AGGGCGTGCG CCTGTACGCC
ACCGACTCGG AAGCCGACCT GCGCAACATC GCCAAGGCCG CACCGGGCTC GAAAGTGTAT
GTGCGTATTC TGACTGAAGG CTCCACCACT GCCGACTGGC CGCTGTCCCG CAAGTTCGGC
TGCCAGACCG ACATGGCCAT GGACCTGCTG ATCCTCGCCC GCGACCTGGG TCTGGTGCCT
TATGGCATCT CCTTCCACGT GGGCTCGCAG CAACGCGACA TCAGCGTGTG GGACGCCGCC
ATCGCCAAGG TCAAGGTAAT CTTCGAACGC CTGAAAGAAG AAGACGGCAT CGAACTGAAG
CTGATCAACA TGGGTGGTGG CTTCCCGGCC AACTACATCA CCCGTACCAA CAGCCTGGAA
ACCTACGCCG AAGAAATCAT CCGCTTCCTC AAGGAAGACT TCGGTGACGA ACTGCCGGAA
ATCATCCTCG AGCCCGGCCG TTCGCTGATC GCCAACGCCG GTATCCTGGT CAGCGAAGTG
GTGCTGGTCG CACGCAAGTC GCGTACCGCC GTCGAGCGCT GGATCTACAC CGACGTGGGC
AAGTTCTCCG GCCTGATCGA AACCATGGAC GAAGCCATCA AGTTCCCGAT CTGGACCGAG
AAGAAAGGCG AAGCCGAGGA AGTGGTCATC GCCGGCCCGA CCTGCGACAG CGCCGACATC
ATGTACGAGA ACTACAAGTA CGGGCTGCCG CTGAACCTGG CCATCGGTGA CCGCCTGTAC
TGGCTGTCGA CCGGCGCCTA CACCACCAGC TACAGCGCAG TGGAATTCAA CGGCTTCCCG
CCGCTGAAGG CCTACTATCT GTAA
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| Protein sequence | MSIQVEDYFA RETFQKMKAF ADKQETPFVL IDTQMISQAY DDLRAGFEFA KVYYAVKANP
AVEIIDLLKE KGSSFDIASI YELDKVMGRG VSADRISYGN TIKKSKDIRY FYEKGVRLYA
TDSEADLRNI AKAAPGSKVY VRILTEGSTT ADWPLSRKFG CQTDMAMDLL ILARDLGLVP
YGISFHVGSQ QRDISVWDAA IAKVKVIFER LKEEDGIELK LINMGGGFPA NYITRTNSLE
TYAEEIIRFL KEDFGDELPE IILEPGRSLI ANAGILVSEV VLVARKSRTA VERWIYTDVG
KFSGLIETMD EAIKFPIWTE KKGEAEEVVI AGPTCDSADI MYENYKYGLP LNLAIGDRLY
WLSTGAYTTS YSAVEFNGFP PLKAYYL
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