Gene Pput_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0867 
Symbol 
ID5193233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp989288 
End bp989818 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID640585326 
Producthypothetical protein 
Protein accessionYP_001266213 
Protein GI148546111 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.430194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.573966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGG GTGCGGTACT GGGTGCTGTC GGTGTGACTG CCGGAGGTGC TGTCGCGACC 
TACAGCTTGG TCAACAAGGG GCCTGAGTAT GCCCAGGTCA CCGACGTGCA GCCGATCAAG
CAACAGGTGA AAACCCCGCG CGAAGTGTGC AAGGACGTTA CCGTTACGCG CCAGGCGCCG
GTCAAGGACC AGCATCAGAT CGCCGGCACC GTCGTGGGTG CGCTGGCCGG TGGCTTGCTG
GGTAACCAGA TCGGTGGTGG CACCGGCAAG AAGATTGCCA CGGTGGCCGG TGCGGTCGGT
GGTGGTTATG CCGGTAACAA GGTGCAGGAA GGCATGCAGG AGCGTGATAC CTACACAACC
ACGCAAACTC GCTGCAACAC GGTCAACGAC ATCAGCGAGA AGGTGGTGGG CTACAACGTG
ACCTATTCCA TCGGTGATCA GGTAGGCAAG GTGAAGATGG ATCGCGAGCC GGGATCGACC
ATTCCGCTGG ACAAGAATGG CAAGTTGATC CTGAGCGAAG CGGGTCAGTA A
 
Protein sequence
MLVGAVLGAV GVTAGGAVAT YSLVNKGPEY AQVTDVQPIK QQVKTPREVC KDVTVTRQAP 
VKDQHQIAGT VVGALAGGLL GNQIGGGTGK KIATVAGAVG GGYAGNKVQE GMQERDTYTT
TQTRCNTVND ISEKVVGYNV TYSIGDQVGK VKMDREPGST IPLDKNGKLI LSEAGQ