| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0866 |
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| Symbol | secF |
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| ID | 5193232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 988246 |
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| End bp | 989154 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585325 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001266212 |
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| Protein GI | 148546110 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.222243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.607881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA TCAACTTCAT GGGCGTGCGC AATGTCGCGT TCGCCATTAC CGTGCTCCTC
ACCGTGCTGG CGCTGTTCAG CTGGTGGCAG AAGGGCCTTA ACTTCGGCCT GGACTTCACC
GGTGGTACGC TGATCGAGCT GACTTACGAG CGCCCGGCCG ACCTCAAGGC AGTGCGTGCC
GAGTTGGTCG ACTCCGGTTT CCACGAGGCG GTAGTGCAGA GCTTTGGCGC TACCACTGAC
TTGCTGGTGC GTATGCCAGG CGATGACCCG CAGCTGGGCA ACAAGGTCGC TGCTGCGCTG
CAAAAGGCCG GGGGTGACAA CCCGGCCACG GTCAAGCGTG TCGAGTTCGT CGGCCCGCAG
GTCGGTGAAG AGCTGCGCGA CCAGGGTGGC ATGGGCATGC TCTTGGCCCT GGGCGGTATC
CTCATCTACC TGGCCTTCCG TTTTCAGTGG AAGTTCGCCG TGGGGGCGAT CGTTTCGCTG
ATCCACGACG TGGTGGTGAC CCTGGGTATC CTGTCGTTCT TCCAGATCAC CTTCGATCTG
ACGGTGTTGG CAGCGGTGCT GGCGATCATT GGCTACTCGC TGAACGACAC CATCGTCGTG
TTCGACCGGG TACGTGAAAA CTTCCGCGTC ATGCGCAAGG CATCGCTGAT CGAAAACATC
AACGTTTCCA CCACCCAGAC CTTGCTGCGC ACCATCGCCA CTTCGGTTTC GACCTTGCTG
GCCATTGCTG CGCTGCTGTT CTTCGGGGGT GACAACCTGT TCGGTTTCTC GCTCGCCCTG
TTCATTGGTG TCATGGCCGG TACCTACTCG TCGATCTATA TCGCCAACGT GGTGCTGATC
TGGCTGAACC TGAACAGCGA AGACCTGATC CCGCCGACCA AGGCCGAGGG TGTGGATGAT
CGTCCGTAA
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| Protein sequence | MKTINFMGVR NVAFAITVLL TVLALFSWWQ KGLNFGLDFT GGTLIELTYE RPADLKAVRA
ELVDSGFHEA VVQSFGATTD LLVRMPGDDP QLGNKVAAAL QKAGGDNPAT VKRVEFVGPQ
VGEELRDQGG MGMLLALGGI LIYLAFRFQW KFAVGAIVSL IHDVVVTLGI LSFFQITFDL
TVLAAVLAII GYSLNDTIVV FDRVRENFRV MRKASLIENI NVSTTQTLLR TIATSVSTLL
AIAALLFFGG DNLFGFSLAL FIGVMAGTYS SIYIANVVLI WLNLNSEDLI PPTKAEGVDD
RP
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