| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0863 |
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| Symbol | tgt |
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| ID | 5193056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 984798 |
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| End bp | 985931 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585322 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001266209 |
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| Protein GI | 148546107 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.313127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCA CCTGTCGAAT GTCCTTCGAA CTGCTGGCCA CCGACGGCAA GGCCCGTCGG
GGTCGCATCA CCTTCCCACG CGGCACCGTG GAAACCCCGG CATTCATGCC GGTAGGGACC
TATGGCACGG TCAAGGGCAT GCTGCCACGC GACATCGAGG CCATCGGCGC CGAGATGATC
CTCGGCAACA CCTTCCACCT GTGGCTGCGT CCGGGCACCG AGGTGATCAA GAAGCACAAC
GGCCTGCACG ATTTCATGCA GTGGAAAGGC CCGATCCTCA CCGACTCCGG TGGTTTCCAG
GTATTCAGCC TGGGTGCCAT GCGCAAGATC AAGGAAGAGG GCGTGACCTT CGCTTCGCCG
GTCGATGGTT CCAAGGTGTT CATGGGCCCG GAAGAGTCGA TGCAGGTTCA GCGTGACCTG
GGCTCGGACG TGGTAATGAT CTTCGACGAG TGCACCCCGT ACCCGGCCGA GCACGATGTG
GCACGCACTT CCATGGAACT GTCGCTGCGC TGGGCCCAGC GCTCGAAGAA CGCCCATGCC
GACAACACCG CAGCGCTGTT CGGCATTGTC CAGGGTGGCA TGTACCAGGA CCTGCGCATG
CGCTCGCTGG AAGGCCTGGA AAACATCGGT TTCGACGGCC TGGCCATTGG CGGCCTGTCG
GTGGGCGAGC CCAAGCACGA AATGATCAAG GTGCTGGATT ACCTGCCGGA CCAGATGCCT
GCTGACAAAC CTCGTTACCT TATGGGGGTA GGCAAACCGG AAGATCTCGT TGAGGGTGTG
CGCCGCGGCG TCGACATGTT CGACTGCGTG ATGCCGACGC GTAACGCGCG CAACGGTCAT
CTGTTCGTTG ATACAGGGGT GATCAAGATC CGCAATGCGT TCCATCGTCA CGATGAATCG
CCGCTGGATC CGACCTGTGA CTGCTATACC TGCACCAACT TCTCGCGCGC CTATCTCCAT
CATCTGGACA AATGCGGCGA AATGCTGAGC AGCATGCTGA ATACCATCCA CAACTTGCGC
CATTATCAGC GCTTGATGGC CGGTTTACGC GAGGCTATTC AACAGGGTAA ATTGGCCGCC
TTTGTCGACG CCTTCTACGC CAAGCGCGGG CTTCCTGTAC CGCCCTTGGA CTGA
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| Protein sequence | MSRTCRMSFE LLATDGKARR GRITFPRGTV ETPAFMPVGT YGTVKGMLPR DIEAIGAEMI
LGNTFHLWLR PGTEVIKKHN GLHDFMQWKG PILTDSGGFQ VFSLGAMRKI KEEGVTFASP
VDGSKVFMGP EESMQVQRDL GSDVVMIFDE CTPYPAEHDV ARTSMELSLR WAQRSKNAHA
DNTAALFGIV QGGMYQDLRM RSLEGLENIG FDGLAIGGLS VGEPKHEMIK VLDYLPDQMP
ADKPRYLMGV GKPEDLVEGV RRGVDMFDCV MPTRNARNGH LFVDTGVIKI RNAFHRHDES
PLDPTCDCYT CTNFSRAYLH HLDKCGEMLS SMLNTIHNLR HYQRLMAGLR EAIQQGKLAA
FVDAFYAKRG LPVPPLD
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