| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0862 |
|---|
| Symbol | queA |
|---|
| ID | 5194927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 983752 |
|---|
| End bp | 984801 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640585321 |
|---|
| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| Protein accession | YP_001266208 |
|---|
| Protein GI | 148546106 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
|---|
| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.228136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.301077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG CCGATTTTTC CTTCGAACTC CCTGATTCCC TGATCGCCCG CCACCCGTTG
GCCGAGCGCC ATGGCAGCCG TCTGCTGGTG CTCGATGGGC CTACCGGCGC GCTGGCGCAC
CGGCAATTCC CCGACTTGCT CGACTATCTG CGCCCCGGCG ACTTGATGGT GTTCAACAAC
ACCCGGGTGA TCCCGGCGCG GTTGTTCGGC CAGAAAGCCT CCGGCGGCAA GCTGGAGGTG
CTGGTCGAAC GCGTGCTCGA CAGCCACCGG GTGCTGGCCC ATGTGCGCGC CAGCAAGGCG
CCCAAGGTTG GCGCGGTCAT CCTCATCGAT GGCGGTGGCG AGGCCGAAAT GGTCGCGCGC
CATGACACGC TGTTCGAGCT TCGCTTCACC GAAGAGGTGC TGCCGTTGCT CGACCGTGTC
GGCCATATGC CGTTGCCGCC CTATATCGAC CGCCCGGACG AGGGCGCCGA CCGTGAGCGC
TACCAGACCG TGTACGCCCA GCGCGCCGGC GCGGTTGCCG CGCCTACCGC AGGCCTGCAC
TTCGACGAGG CGCTGCTGGA AAAGATCGCC GACAAGGGCG TCGAGCGCGC TTTCGTCACC
CTGCATGTGG GCGCCGGCAC CTTCCAGCCG GTGCGGGTCG ACAAGATCGA AGACCACCAC
ATGCATAAAG AGTGGCTCGA AGTGGGCCAG GATGTGGTCG ATGCCATCGA GGCCTGCCGG
GCCCGTGGTG GTCGGGTGAT CGCGGTTGGC ACCACCAGTG TGCGTTCGCT GGAAAGCGCC
GCGCGTGATG GCGTGCTCAA GGCCTTCAGT GGCGATACCG ACATCTTCAT CTACCCGGGC
CGGCCATTCC ATGTGGTCGA TGCCCTGGTC ACCAACTTCC ATCTGCCGGA GTCCACGCTG
CTGATGCTGG TCTCGGCTTT CGCCGGCTAC CCCGAGACCA TGGCTGCCTA CGCAGCGGCG
GTCGAGCACG GGTACCGCTT CTTCAGTTAC GGTGATGCCA TGTTCATCAC CCGCAATCCG
GCGCCACGCG GGCCCGAGGA TCAAGCATGA
|
|---|
| Protein sequence | MRVADFSFEL PDSLIARHPL AERHGSRLLV LDGPTGALAH RQFPDLLDYL RPGDLMVFNN
TRVIPARLFG QKASGGKLEV LVERVLDSHR VLAHVRASKA PKVGAVILID GGGEAEMVAR
HDTLFELRFT EEVLPLLDRV GHMPLPPYID RPDEGADRER YQTVYAQRAG AVAAPTAGLH
FDEALLEKIA DKGVERAFVT LHVGAGTFQP VRVDKIEDHH MHKEWLEVGQ DVVDAIEACR
ARGGRVIAVG TTSVRSLESA ARDGVLKAFS GDTDIFIYPG RPFHVVDALV TNFHLPESTL
LMLVSAFAGY PETMAAYAAA VEHGYRFFSY GDAMFITRNP APRGPEDQA
|
|---|
| |