Gene Pput_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0856 
Symbol 
ID5195056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp978570 
End bp978866 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content53% 
IMG OID640585314 
Productputative transcriptional regulator 
Protein accessionYP_001266202 
Protein GI148546100 
COG category[K] Transcription 
COG ID[COG3636] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02684] probable addiction module antidote protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.18856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.623315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AATTGATCCC GTTTGATATG GCAGCCTTGT TGAGCAGCGA TGAGGCAATC 
AGTGAATACC TTAGCCAGGT GCTATCAAAT GGCGATACCG AGGAAATCAT TCGAGCACTT
GGCCATATCG CTCGTGCACG GGGCATGACA CATATTGCTA CGGAGAGTGG GCTGGGTAGA
GAAAGCCTGT ACAAGGCGCT GAGCCCTGGC GCGAAGCCTC GTTTTGACAC TGTATTGAGG
GTCATTCGTG CTCTGGGGGT GGACCTTCTC GTTCAGCCAC ATGCAATGAC CCGCTGA
 
Protein sequence
MSEKLIPFDM AALLSSDEAI SEYLSQVLSN GDTEEIIRAL GHIARARGMT HIATESGLGR 
ESLYKALSPG AKPRFDTVLR VIRALGVDLL VQPHAMTR