| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0836 |
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| Symbol | |
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| ID | 5192358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 958296 |
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| End bp | 960314 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585294 |
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| Product | cytochrome o ubiquinol oxidase, subunit I |
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| Protein accession | YP_001266182 |
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| Protein GI | 148546080 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.630143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.997274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGTA AATTAAGCCT GGAGGCGATA CCCTATCACG AGCCGATAGT CATGGTGACG
CTTGCCATGA TCGCGCTCGG CGGTATCGCT GTCGTCGGTC TTATCACCTA TTTCCGCAAG
TGGACCTACT TGTGGAGCGA GTGGCTGACT ACTGTCGACC ACAAAAAGAT CGGCGTGATG
TACATCATCG TCGCGATGGT CATGCTGCTG CGTGGCTTTG CCGACGCCAT CATGATGCGT
ACCCAGCTGG CTGCCGCAAC CGGCGGCTCC GAAGGCTATC TGCCGCCTGA ACACTATGAC
CAGATCTTCA CCGCTCACGG TGTGATCATG ATCATCTTCA TGGCGATGCC GTTCTTCACC
GGCCTGATGA ACCTGGCGGT TCCTCTGCAG ATCGGTGCAC GTGACGTTGC CTTCCCGTTC
CTGAACTCCC TGAGCTTCTA CCTGCTGCTG GCAGGCGTGC TGCTGGTCAA CATCTCGCTG
GGCGTTGGTG AATTCGCCAA GACCGGCTGG GTTGCCTATC CGCCGCTCGC GGGCATTCAG
TACAGCCCTG GGGTGGGTGT CGACTACTAC ATCTGGGCGC TACAGCTATC CGGATTGGGT
ACGACGCTTA CCGGCGTGAA CTTCCTCGTC ACCGTGATGA AGATGCGCGC ACCTGGCATG
AAACTGATGG ACATGCCGAT CTTCACCTGG ACCTGCACCT GGGCCAACGT ACTGATCGTC
GCTTCGTTCC CGATCCTGAC TGCTGCACTC GCTCTGCTGA CTGTTGACCG TTATCTGGAC
TTCCACATCT TCACCAACGA GCTTGGTGGG AACCCGATGA TGTACGTCAA CCTGTTCTGG
GCGTGGGGTC ACCCTGAGGT TTACATCCTG ATCCTGCCGG CCTTCGGCGT GTTCTCGGAA
GTCACTTCGA CGTTCTCTGG CAAACGCCTG TTCGGCCACC ACTCGATGAT TTACGCATCG
GGCGCGATCG CCATCCTCGG CTTTGCTGTA TGGCTGCACC ACTTCTTCAC CATGGGTGCC
GGCGCCAGCG TCAACACCTT CTTCGGCCTG GCGACGATGC TGATCTCCAT TCCGACCGGT
GTGAAGCTGT TCAACTGGCT GTTCACCATG TACCAAGGCC GTGTGCGCTT CACCGCACCG
ATGCTCTGGA CCCTGGGCTT CATGGTCACC TTCTCCATCG GTGGCATGAC CGGCGTACTG
CTGGCCGTTC CGGGTGCTGA CTTCGTCCTG CACAACAGCC TGTTCGTAAT TGCGCACTTC
CACAACGTGA TCATCGGTGG CGCGGTATTC GGCTACATCG CCGGTTTCGC CTTCTGGTTC
CCGAAAGCCT TCGGCTTCAC CCTGAACGAG AAGTGGGGCA AAGCTGCCTT CTGGTTCTGG
CTGTCGGGCT TCTACGTTGC GTTCATGCCG CTGTACGCCC TGGGCTTCAT GGGCATGACC
CGTCGTCTGA ACCACTCCGA CAACCCACTG TGGGAACCCT ACCTGTACGT AGCCGTTGTC
GGCGCCGTGC TGATCCTGTT CGGTATCGCT TGCCAGCTGA TCCAGATCTT CGTTTCGGTC
CGCGACCGCA ACCAGAACCT GGACGTGACC GGCGACCCAT GGGGCGGCCG TACCCTGGAA
TGGTCGACTT CTTCGCCACC TCCGTTCTAC AACTTCGCTC ACATGCCTGA GAAAGTTGGC
CTGGACTGCT GGCACGAAGC CAAGGAAGCG GGCGTTGCGT ACAAGGCCCC GGCCAAGTAC
GAAGCCATTC ACATGCCGAG CAACACTGCT ACCGGTCTGT TCATGGGCCT GTTCCTGACC
GTCTTCGGCT TCGCCTTCAT CTGGCACATC TGGTGGCTGG TGGGCGCGAG CCTGGTTGCA
ACCATCGCTG TCTTCGTTCG CCACGCTGCA CGTGACGACC AGGGCTACAT GGTTCCGGCC
GAAGAAGTGG CGCGCATCGA AGGCGAGCGT ATGAAAGCGC TGGCCAAAGC AGGTGCTCTG
CCTGCCGGCG CACGTGTCGA ATCGTTTGAG CGGGTGTAA
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| Protein sequence | MFGKLSLEAI PYHEPIVMVT LAMIALGGIA VVGLITYFRK WTYLWSEWLT TVDHKKIGVM
YIIVAMVMLL RGFADAIMMR TQLAAATGGS EGYLPPEHYD QIFTAHGVIM IIFMAMPFFT
GLMNLAVPLQ IGARDVAFPF LNSLSFYLLL AGVLLVNISL GVGEFAKTGW VAYPPLAGIQ
YSPGVGVDYY IWALQLSGLG TTLTGVNFLV TVMKMRAPGM KLMDMPIFTW TCTWANVLIV
ASFPILTAAL ALLTVDRYLD FHIFTNELGG NPMMYVNLFW AWGHPEVYIL ILPAFGVFSE
VTSTFSGKRL FGHHSMIYAS GAIAILGFAV WLHHFFTMGA GASVNTFFGL ATMLISIPTG
VKLFNWLFTM YQGRVRFTAP MLWTLGFMVT FSIGGMTGVL LAVPGADFVL HNSLFVIAHF
HNVIIGGAVF GYIAGFAFWF PKAFGFTLNE KWGKAAFWFW LSGFYVAFMP LYALGFMGMT
RRLNHSDNPL WEPYLYVAVV GAVLILFGIA CQLIQIFVSV RDRNQNLDVT GDPWGGRTLE
WSTSSPPPFY NFAHMPEKVG LDCWHEAKEA GVAYKAPAKY EAIHMPSNTA TGLFMGLFLT
VFGFAFIWHI WWLVGASLVA TIAVFVRHAA RDDQGYMVPA EEVARIEGER MKALAKAGAL
PAGARVESFE RV
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