| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0822 |
|---|
| Symbol | |
|---|
| ID | 5191388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 919619 |
|---|
| End bp | 920953 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640585281 |
|---|
| Product | outer membrane porin |
|---|
| Protein accession | YP_001266169 |
|---|
| Protein GI | 148546067 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.43059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.142629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTCCG CGTTTCGTTT TACCCCGCTT TTCATTGCGT TGACTGCAAC GATCCCTTTC
GCCGCCCAGG CAGATGAAGA CAAGGCTGAT GGCTTCATCG AAGGTTCGTC CTTCAACCTG
CATTTTCGTA ATGCCTACTT CAACCGCGAC AACCACAATG CCGGCGTGCG CGACACCCGC
GAGTGGGGCC AGGGCGCGGT AGCGCGTTTC GAGTCGGGCT ACACCCCAGG TGTGGTCGGC
TTTGGCCTGG ATGCTCATGC CATGCTGGGC TTGAAGCTCG ACGGCGGTGG CGGCCATGCC
GGCACCAGCA TCCTGCCCGA ACACATCAAG GACGACGGCG AACTGGGCGC TGCCCCGCAT
TCGTTCTCCA CTGCCGGTGC TGCGGTCAAG CTCAAGGCCT TCGACACCGA ACTGAAAGCC
GGTGACCTGT TCCTCACCAA CCCGGTGATC GCCGGCGGTG AAACGCGCAT GCTGCCGCAA
ACTTTCCGCG GTGTAAGCCT GACCAACACC AGCATTGATG GCCTGTTGCT CGAAGGCGGC
CAGGTCAGCT TCACCCACCC GTACAACCAG AGCGGCCACC GCCGCATCGA CACCTACTAC
GGGTCACTGG ACGAGCACGA CAAGAGCAAG CACCTGAACT GGGCGGGCGC GTCGTGGAGC
GGTACCGAAA ACATCACCGC CAACCTGTAC GCCGCCGAGC TGAAGGACAT CTGGAACCAG
TACTACGCTG ACTTCGACTA CACCTATGTG GTCAATGACC TGGTCAGCCT GAACCCAGGC
GTGCACTTCT ATCACACCCA GGACACCGGC CAGGCCCTGC TAGGCAAGAT CGACAACAAC
ACCTACAGCG TGCACTTCAC CGTCAACGCA GGCTTCCACA GCGTCACTGC CGCCTACCAG
CGAGTGAACG GCAACACGCC GTTCGACTAC ATCAACCTGG GCGACAGCGT GTACCTGGAC
AACTCGCGCA TGTACTCGGA CTTCAACGCG CCGAACGAGC GTTCGTGGAA ACTGCAGTAC
GGCTATGACT TCGCCGGTGT CGGCGTGCCT GGTTTGTCTA CCTCGCTGTC CTACTCGCGC
GGCGAGGCTG ACCTGACCAA GGCCACTCAG GACACCACTC ACTACGACTA CTACCGTGAA
GATGGCAAGA ACGCCATGCA CTGGGAGCGT GACCTGGACG TGAAATACGT GTTCCAGGAA
GGTGACCTCA AGGACCTGTC GGTGCTGGTG CGTTATGCCA CCCACCGCGG CAGCCAGGGT
TATGCGTCGA TCGACAGCAA CAGCGACAAC GATGAAGTGC GGGTCATCGT CGACTACCCA
CTGAACGTGT TCTGA
|
|---|
| Protein sequence | MPSAFRFTPL FIALTATIPF AAQADEDKAD GFIEGSSFNL HFRNAYFNRD NHNAGVRDTR
EWGQGAVARF ESGYTPGVVG FGLDAHAMLG LKLDGGGGHA GTSILPEHIK DDGELGAAPH
SFSTAGAAVK LKAFDTELKA GDLFLTNPVI AGGETRMLPQ TFRGVSLTNT SIDGLLLEGG
QVSFTHPYNQ SGHRRIDTYY GSLDEHDKSK HLNWAGASWS GTENITANLY AAELKDIWNQ
YYADFDYTYV VNDLVSLNPG VHFYHTQDTG QALLGKIDNN TYSVHFTVNA GFHSVTAAYQ
RVNGNTPFDY INLGDSVYLD NSRMYSDFNA PNERSWKLQY GYDFAGVGVP GLSTSLSYSR
GEADLTKATQ DTTHYDYYRE DGKNAMHWER DLDVKYVFQE GDLKDLSVLV RYATHRGSQG
YASIDSNSDN DEVRVIVDYP LNVF
|
|---|
| |