Gene Pput_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0717 
Symbol 
ID5190303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp805800 
End bp806141 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID640585175 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_001266065 
Protein GI148545963 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0125807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTC TGCCACCCTG CCCAAAATGC AATTCCGAAT ACACCTATGA GGATGGCACT 
CAGCTGATCT GCCCTGAATG CGCCCACGAG TGGTCGGCCG GCGGCGATGC CGAGGCGGCC
AGTGACGAGG TGGTGAAAAA GGATTCGGTC GGCAACATCC TGCAAGACGG TGACACCGTC
ACCGTGATCA AGGACCTCAA GGTCAAGGGT TCGTCCCTGG TGGTCAAGGT TGGCACCAAG
GTCAAGAACA TCCGCCTGTG CGACGGCGAC CACGACATCG ACTGCAAAAT CGACGGCATC
GGTGCCATGA AACTGAAGTC CGAGTTCGTC CGCAAAGTCT GA
 
Protein sequence
MSTLPPCPKC NSEYTYEDGT QLICPECAHE WSAGGDAEAA SDEVVKKDSV GNILQDGDTV 
TVIKDLKVKG SSLVVKVGTK VKNIRLCDGD HDIDCKIDGI GAMKLKSEFV RKV