Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0711 |
Symbol | |
ID | 5191601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 800600 |
End bp | 803038 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585169 |
Product | ATP-dependent protease-like protein |
Protein accession | YP_001266059 |
Protein GI | 148545957 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.807483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0469717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGATC CTGTCGCTGC GCGCCTGCGT CTTGCGCCTG AAGCCCTGAC CCGGCGTTTC TCACCCGAGC AGTTTGCTTT TACCCATACC GACGATCTGG AGCCGTTTCG CGGAGTTCTG GGCCAGGAAC GTGCTGTCGA GGCCCTGCAG TTTGGCGTGG CCATGCCGCG TCCTGGTTAC AATGTGTATG TGATGGGCGA GCCCGGCACC GGGCGCTTCT CGTTCGTCAA GCGCTACCTC AAGGCCGAGG GCAAGCGCCA GCAGACCCCG GCTGACTGGG TCTACGTCAA CCACTTCGAC GACACCCGTG AACCACGCGC ACTGGAGCTG CCGTCCGGAA GCGCCGCCGA GTTCATCAGC GACATGGGCG GATTGATCGA CAACCTGCTG TCGACGTTCC CGGCGGTGTT CGAACACCCG TCCTACCAGC AGAAGAAGGG CGCCATCGAC CGCGCTTTCA ACCAGCGTTA TGACCGTGCT CTGGATGTGA TCGAGCGCGC GTCGCTGGAA AAGGACGTGG CCTTGTACCG CGATGCCAGC AACGTCGCCT TCACGCCGAT GGCTGATGGC AAGGCGCTGG ATGAAGCTGA ATTTGCCCAA TTGCCGGAGG AGGTGCGCGA GCAGTTCCAC GAGGACATTG CCCTGCTTGA GGAGCGCCTC AACGAGGAGC TGGCCAGCCT GCCGCAATGG AAGCGCGAAT CGAACAACCA GCTGCGCCAG CTCAACGAAG AAACCATCAC CCTGGCACTG CAGCCGTTGC TGGCGCCGCT GTCGGAAAAG TACGCCGAAA ACGCGGCGGT GTGCGCCTAC CTGCAATCGG TGCAATTGAA CCTGTTGCGT ACGTTGGTCG AGCAACTGGT CGATGACAGC AAGTCCGACG CCGTGGCCCG CAAGCTGCTT GAAGAGCAGT ACGCGCCCAG CCTGGTGGTG GGCCATCACG CTGACGGTGG TGCGCCGGTG GTGTTCGAGC CGCACCCGAC CTACGACAAT TTGTTTGGCC GTATCGAATA CAGCACCGAC CAAGGTGCGC TGTATACCTC CTATCGCCAA CTGCGCCCAG GCGCGCTGCA CCGGGCCAAC GGCGGCTTCC TGATTCTGGA AGCCGAGAAA ATGCTGGGCG AGCCGTTCGT ATGGGACGCG CTCAAGCGTG CGCTGCAGTC GCGCAAGCTG AAGATGGAGT CGCCAATCGG TGAGCTGGGC CGTGTTGCCA CTGTCAGCCT GCAGCCGCAG GTGATTCCGC TGAACGTCAA ACTGGTGATC ATCGGCTCGC GCCAGCTGTA CTACGCGCTG CAGGACCACG ACCCGGACTT CCAGGAGATG TTCCGCGTGC TGGTGGACTT CGATGAAGAC ATGCCGATGG TCGACGAGAA CCTGGAGCAG TTCGCCCAGC TGTTGCGCAC CCGCACCAAC GAAGAGGGCA TGGCGCCGCT GACCAGTGAC GCGGTGGCGC GTCTGGCCAC CTACAGTGCG CGTCTGGCTG AAAACCAGTC ACGCCTGTCG GCGCGTATCG GCGACCTGTT CCAGCTGGTC AGCGAGGCTG ATTTCATTCG CCAGCTGGCC AGTGACGAAA TGACCGACGC AGGCCACATC GAGCGTGCGC TCAAGGCCAA GGCCACCCGT ACCGGCCGTG TGTCGCAACG GGTGCTGGAC GACATGCTCG CCGGCATCAT CCTGATCGAC ACAGAAGGCG CGGCCATCGG CAAGTGCAAC GGCCTGACCG TGCTGGAAGT GGGTGACTCG GCGTTCGGCA TGCCCGCGCG TATTTCGGCC ACCGTCTACC CCGGCGGCAG CGGTATTGTC GATATCGAGC GTGAGGTCAA CCTTGGCCAG CCGATCCACT CCAAAGGGGT GATGATCCTC ACCGGTTACC TGGGCAGCCG CTATGCCCAG GAGTTCCCGC TGGCGATCTC CGCGAGCATC GCCCTGGAGC AGTCCTACGG CTACGTGGAC GGCGACAGCG CCTCGCTGGG CGAAGCCTGC ACGCTGATCT CGGCCTTGTC GCGCACGCCG CTCAAGCAGT GCTTCGCCAT CACAGGTTCC ATCAACCAGT TCGGTGAAGT GCAGGCGGTG GGTGGGGTGA ACGAGAAGAT CGAGGGCTTC TTCCGCCTCT GCGAGGCGCG TGGCCTGACC GGCGAGCAGG GGGTGATCAT TCCGCGTGCC AACGTCGCCA CCCTGATGCT TGACGAGCGC GTGTTGCAGG CGGTGGAGAA CGGCATGTTC CACGTCTACG CGGTCAGCCA GGCTGATGAG GCGCTGAGCC TGCTGGTGGG CGAGGAGGCC GGGGTACTCG ACGACAAGGG GCTGTTCACC GAGGGCAGCG TCAATGCTCG GGTGGTGGAA CGCCTGCGTG AAATTGCCGA GATGATCAGC GAGGAAGACA TCGAGAAGGC AGAAAAGGAA CGCCTGGAAG AGGTAATTGC CCAGGCCAAA CCGGCCTGA
|
Protein sequence | MPDPVAARLR LAPEALTRRF SPEQFAFTHT DDLEPFRGVL GQERAVEALQ FGVAMPRPGY NVYVMGEPGT GRFSFVKRYL KAEGKRQQTP ADWVYVNHFD DTREPRALEL PSGSAAEFIS DMGGLIDNLL STFPAVFEHP SYQQKKGAID RAFNQRYDRA LDVIERASLE KDVALYRDAS NVAFTPMADG KALDEAEFAQ LPEEVREQFH EDIALLEERL NEELASLPQW KRESNNQLRQ LNEETITLAL QPLLAPLSEK YAENAAVCAY LQSVQLNLLR TLVEQLVDDS KSDAVARKLL EEQYAPSLVV GHHADGGAPV VFEPHPTYDN LFGRIEYSTD QGALYTSYRQ LRPGALHRAN GGFLILEAEK MLGEPFVWDA LKRALQSRKL KMESPIGELG RVATVSLQPQ VIPLNVKLVI IGSRQLYYAL QDHDPDFQEM FRVLVDFDED MPMVDENLEQ FAQLLRTRTN EEGMAPLTSD AVARLATYSA RLAENQSRLS ARIGDLFQLV SEADFIRQLA SDEMTDAGHI ERALKAKATR TGRVSQRVLD DMLAGIILID TEGAAIGKCN GLTVLEVGDS AFGMPARISA TVYPGGSGIV DIEREVNLGQ PIHSKGVMIL TGYLGSRYAQ EFPLAISASI ALEQSYGYVD GDSASLGEAC TLISALSRTP LKQCFAITGS INQFGEVQAV GGVNEKIEGF FRLCEARGLT GEQGVIIPRA NVATLMLDER VLQAVENGMF HVYAVSQADE ALSLLVGEEA GVLDDKGLFT EGSVNARVVE RLREIAEMIS EEDIEKAEKE RLEEVIAQAK PA
|
| |