| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0690 |
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| Symbol | |
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| ID | 5192027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 774283 |
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| End bp | 775104 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585148 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001266038 |
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| Protein GI | 148545936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0225851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT TCCCTTCCTC CCCCAAGCCC GTGGTAAAGC CAGCGGGCGC CGGCCTGTTC
GGCTTTCGCA CCCGGTTACT GCTGACCTGG CTGGCGCTGT TCGGGCTGTT TGTCGCCTTC
TTCCTCAGCT TTGACCTGAA GTTCGCCATC ATTCTGGAGA AGTTTCCCAA CCTGGCCGGT
TTCAAGCTGG GGCCCAATGG TTTTCTGCAA GGCGCCGCAC TGACCCTGTT CCTGTGCCTG
TGCTCGATGG TGGTATCCGT GCTGCTCGGC TTTGCCGCCG CGCTGGCACG GTTATCCAAC
AGCGCGGTGC TGGTGGGTGT GGCCAGCTTC TACACCTCGT TCTTCCGTGG CACGCCGCTG
CTGATCCAGA TTCTGCTGAT CTACCTGGGG CTGCCGCAGG TGGGCCTGGT ACCCGGCGCC
ATCAGCGCCG GCATCATTGC CTTGTCGCTG AACTACGGGG CCTACCTGAG CGAGATTTTC
CGCGCCGGCA TCCTCGGCGT GGCCCGTGGG CAACGTGAAG CAGCATTGGC GCTGGGCATG
CGCACGCCGC AGATCTTCTG CCACATCATC CTGCCCCAGG CCATGCGGGT GATCATTCCG
CCCACCGCCA ACCAGTTCAT CTCGATGCTC AAGGACTCGT CGCTGATTTC CGTGATGGGG
GTTTGGGAGG TGATGTTTCT GGCGCAGTCG TATGGGCGTT CGAGCTATCG CTACCTGGAA
ATGCTGACCA CCGCCGCCGT GATCTACTGG GTGCTGTCGA TACTGCTGGA GCTGCTGCAG
GCGCGCCTGG AACGGCATTT TGGCAAGGCT TATCAGCGCT GA
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| Protein sequence | MSTFPSSPKP VVKPAGAGLF GFRTRLLLTW LALFGLFVAF FLSFDLKFAI ILEKFPNLAG
FKLGPNGFLQ GAALTLFLCL CSMVVSVLLG FAAALARLSN SAVLVGVASF YTSFFRGTPL
LIQILLIYLG LPQVGLVPGA ISAGIIALSL NYGAYLSEIF RAGILGVARG QREAALALGM
RTPQIFCHII LPQAMRVIIP PTANQFISML KDSSLISVMG VWEVMFLAQS YGRSSYRYLE
MLTTAAVIYW VLSILLELLQ ARLERHFGKA YQR
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