| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0675 |
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| Symbol | |
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| ID | 5193310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 760182 |
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| End bp | 760592 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585135 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_001266027 |
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| Protein GI | 148545925 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0357739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGGC AACGCGGTAT CACCCTGATC GAACTGATGA TCGTCGTCGC GATCATCGGC
ATTCTGGCGA CCATCGCCTT ACCGATGTAC ACCAACCATC AGGCACGCTC CAAGGCCGCG
GCCGGGTTGC TGGAGATCAG CGCGCTGAAG ACGGCGATGG ATCTGCGGCT GAATGATGGA
AAGGATGTCG CGGATGTCGC CGCCCTGGGT GGCCAGCCGG CGACGGCGCA TTGTGCGATC
ACGGCGAGCG GCAAGGCTGC AGATGGTAGC GGCAGCATTG TTTGCACCCT GGTGGATGCG
CCTGCCAACG CACTGGGCAA GGCCCTGACT CTGACGCGTT CGGCCAGCGG CTGGGCGTGC
ACGACCGACA TCGAGGAAGA CCTGGCGCCC AAAGGGTGCA AGGGGGCTTG A
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| Protein sequence | MKGQRGITLI ELMIVVAIIG ILATIALPMY TNHQARSKAA AGLLEISALK TAMDLRLNDG
KDVADVAALG GQPATAHCAI TASGKAADGS GSIVCTLVDA PANALGKALT LTRSASGWAC
TTDIEEDLAP KGCKGA
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