| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0673 |
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| Symbol | |
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| ID | 5191707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 757888 |
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| End bp | 758754 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585133 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001266025 |
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| Protein GI | 148545923 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0406181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAT GGGCTTTGCT GGCTGAACAG CCAGCGTATT TCCTCACCCT TGCCACGGTG
CTCGGCCTGC TGGTGGGCAG CTTTATCAAC GTGCTGGTGT ATCGCCTGCC GATCATGCTG
GAGCGCCAAT GGCAGCGTGA GGCGCAAGAG GTATTGGGGC TGCCGACCAC GCAGCACCCG
CGTTTCGACC TGTGCCTGCC CGCCTCCCGG TGCCCACACT GCGCGCACCG GATTCGTGCG
TGGGAGAACA TTCCGGTCAT CAGCTACCTG GCCTTGGGCG GGCGCTGTTC GTCCTGCAAA
AACCGCATCA GCCTGCGTTA CCCGGTAGTG GAAGTGGCCA GCGCGCTGCT GTCGCTGGTA
GTGGCCTGGC GCTTCGGCGC TTCGGTAGAG GCGTTGCTGG CGTTGCCGCT GACCTGGTGC
CTGCTGGCGC TGAGCCTGAT CGATGCGGAC CACCAGCTGC TGCCGGATGT GCTGGTGCTG
CCGACCATGT GGCTAGGGCT GATCGTCAAT GCCTTTGGCA TCCATGTGCC CCTGGCCGAC
GCACTGTGGG GCGCAGTGGC CGGGTACCTC AGCCTGTGGA CGGTGTACTG GGTGTTCAGG
CTGGTCACCG GCAAGGAAGG CATGGGCTAT GGCGATTTCA AGCTGATGGC GCTGATCGGG
GCGTGGGGGG GTTGGCAGGT GCTGCCGTTG ACGCTGCTGT TGTCGTCGGT GGTGGGGGCG
CTTGTTGGCC TGTGCTTGCT GCGTTTTCGC CGGCATGCCT TGGGCACGGC TATCCCGTTT
GGCCCTTATC TGGCAATTGC GGGGTGGATT GCCGTGCTCT GGGGTGATGA AATATACGCC
TCATACATAC AACTGCTTGG ATACTGA
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| Protein sequence | MTLWALLAEQ PAYFLTLATV LGLLVGSFIN VLVYRLPIML ERQWQREAQE VLGLPTTQHP
RFDLCLPASR CPHCAHRIRA WENIPVISYL ALGGRCSSCK NRISLRYPVV EVASALLSLV
VAWRFGASVE ALLALPLTWC LLALSLIDAD HQLLPDVLVL PTMWLGLIVN AFGIHVPLAD
ALWGAVAGYL SLWTVYWVFR LVTGKEGMGY GDFKLMALIG AWGGWQVLPL TLLLSSVVGA
LVGLCLLRFR RHALGTAIPF GPYLAIAGWI AVLWGDEIYA SYIQLLGY
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