Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0638 |
Symbol | |
ID | 5192513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 722388 |
End bp | 723047 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640585093 |
Product | paraquat-inducible protein A |
Protein accession | YP_001265990 |
Protein GI | 148545888 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.205765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATT CTGTCGAACC TGAAACCCTG GACCAGCTGC CGTTGGACGA GCTTGTCGCC TGCCATGAAT GTGACCTGCT GCTGCGCAAG CCCGTGCTGC AGCATGATGA GAAAGCCCAA TGCCCGCGCT GCGGCTACGA GCTCTATGCC CACCGGCACA ATGTGGTCAA TCGCAGCCTG GCCTTGGTAC TGTCGGCCCT TTTGCTGTTC GTGCCGGCCA ATTTCCTGCC GATCATGCAG TTGCACCTGC TTGGTCAGAC TTCGGACGAT ACGGTCTGGA GTGGCGTGCT AGGCCTGTAC AACTCGGGAA TGCGCGGTGT TGCCGTAGTG GTGTTGCTCT GCAGCATGGT CATTCCGCTG GCGAAACTGC TCTGTCAGCT GGCTGTGCTG TTGAGCATCC GCTTGAACTT CGGGCGTGAC TACGGCCTGG TCTTCTACCG CATCTATCAC CATCTGCGTG ACTGGGGCAT GCTCGAGGTC TATTTCATGG GGGTGCTGGT GGCCATCGTC AAGCTGGTGG ACCTGGCCGA ACTGACCGTG GGCCTTGGGC TGTTCTGTTT CATCAGTCTG TTATTGATCC AGGTGTGGCT CGAGGTGGTG ATGTCGCCCC ACCAGATCTG GAGTGCGCTA TCGGGGGAGG ACCTGCATGC GGGCGATTGA
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Protein sequence | MSNSVEPETL DQLPLDELVA CHECDLLLRK PVLQHDEKAQ CPRCGYELYA HRHNVVNRSL ALVLSALLLF VPANFLPIMQ LHLLGQTSDD TVWSGVLGLY NSGMRGVAVV VLLCSMVIPL AKLLCQLAVL LSIRLNFGRD YGLVFYRIYH HLRDWGMLEV YFMGVLVAIV KLVDLAELTV GLGLFCFISL LLIQVWLEVV MSPHQIWSAL SGEDLHAGD
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