Gene Pput_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0638 
Symbol 
ID5192513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp722388 
End bp723047 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID640585093 
Productparaquat-inducible protein A 
Protein accessionYP_001265990 
Protein GI148545888 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.205765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATT CTGTCGAACC TGAAACCCTG GACCAGCTGC CGTTGGACGA GCTTGTCGCC 
TGCCATGAAT GTGACCTGCT GCTGCGCAAG CCCGTGCTGC AGCATGATGA GAAAGCCCAA
TGCCCGCGCT GCGGCTACGA GCTCTATGCC CACCGGCACA ATGTGGTCAA TCGCAGCCTG
GCCTTGGTAC TGTCGGCCCT TTTGCTGTTC GTGCCGGCCA ATTTCCTGCC GATCATGCAG
TTGCACCTGC TTGGTCAGAC TTCGGACGAT ACGGTCTGGA GTGGCGTGCT AGGCCTGTAC
AACTCGGGAA TGCGCGGTGT TGCCGTAGTG GTGTTGCTCT GCAGCATGGT CATTCCGCTG
GCGAAACTGC TCTGTCAGCT GGCTGTGCTG TTGAGCATCC GCTTGAACTT CGGGCGTGAC
TACGGCCTGG TCTTCTACCG CATCTATCAC CATCTGCGTG ACTGGGGCAT GCTCGAGGTC
TATTTCATGG GGGTGCTGGT GGCCATCGTC AAGCTGGTGG ACCTGGCCGA ACTGACCGTG
GGCCTTGGGC TGTTCTGTTT CATCAGTCTG TTATTGATCC AGGTGTGGCT CGAGGTGGTG
ATGTCGCCCC ACCAGATCTG GAGTGCGCTA TCGGGGGAGG ACCTGCATGC GGGCGATTGA
 
Protein sequence
MSNSVEPETL DQLPLDELVA CHECDLLLRK PVLQHDEKAQ CPRCGYELYA HRHNVVNRSL 
ALVLSALLLF VPANFLPIMQ LHLLGQTSDD TVWSGVLGLY NSGMRGVAVV VLLCSMVIPL
AKLLCQLAVL LSIRLNFGRD YGLVFYRIYH HLRDWGMLEV YFMGVLVAIV KLVDLAELTV
GLGLFCFISL LLIQVWLEVV MSPHQIWSAL SGEDLHAGD