| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0612 |
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| Symbol | |
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| ID | 5191062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 690114 |
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| End bp | 691778 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585064 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001265964 |
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| Protein GI | 148545862 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.331915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCTC TGGTCGTGCC CCTGATGTTG CTGCTTTGGG CACTTGCTGC CCACGCCGAC
CCGTTGCCGG GGTTTCTCGA CAGCCATGAG TACGAGCGGC GTCTGCCCAG CGCCAACCTG
CCGATGACGG ACTACTCCCC TGTGAACCCC CGCATACGGC TGGCCGGGGC GGCTATCGAC
AACCCCGACT GGGCCCCGGC CAACACCCGG CTGGTACTGC ATAAAGTGCG CTTCGAGGGC
GGCACGGTGT TTCCCCTGGG CGACCTGCGC GAACACTATC AGCCGCTGAT CGGGCGCGAA
ACCACGTTGG GTGAATTGCA GCAATACACC CAGCGCCTGA CCCAACGCTA CCGGCAGGAG
GGCTACTTGC TGTCGTATGC CTACCTGCCT CCTCAGGATG TGGCCTATGG CAGGGTCAAC
GTGGTGCTGG TCGAAGGTTA CGTCCGTGAT TACCGCGTGG ACGGCGATAT TGGGCCGGCC
AGCGAGTATT TGCAGCAGCT GCTGGCGCGC ATTGAGGCCG AGCGCCCACT GACCCGCGAA
ACGCTGGAGC GCTATCTGGG CCTGGCTACG CGCATGCCAG GGGTTGTGGT AGAGGCCGAA
CTGGCAATGG CGCGGGCTGC CGATGGTGTC GCCCAGTTGA CCGTGCATGC ACGGCGCAAG
CCGCTCAGCG CCGCTGTGAG CGTGGCCGAC TCCAGCCGTG ATGCTGCACA GGCCCTGATC
ACCGTAGCCA GCAATGCCCA GACCCGCCAT GGCGAACGCG TCACGGCCAG CTGGCTGTTG
CCCCCTGGCA ATGACCGGGT CTACTACCAG CGTCTCGATT ACAGCCAGTA CCTGGACGCC
GCCGGTAGCC AACTGCTGCT GTCGGCGTCG CGCTACCGCA GCGAGCCCGC CACGCGCATA
CGTTTGGACG ATGGCCGCGA TATCACCCGC GAGCAGGACA GTGAGCGCTA TGCGATCGGC
CTGCGTCAGC CGGTGCTTGT CAGGCCGAAT GAGTGGCTGG CGGTGCAGGG CCACGTGTAC
TCGGTCAGTG AGCATGATGA AGACCGGATG GCCGAACAGC CACCGTCTCG CAAGTACGAC
ACTTATGTGC GGGCGCTGTC ATTCGAAGGT GACTGGCGCA AGGTGGAGCA GGGGCGTTTG
CGTATCGTCA GTGCCGGGGT CCATCAGGGG CTGGACTACC TGGGGGCACG CAGCGATGCT
GACTACGATC TCGACTTCCT GCGCTTGCGG CTTTCCGGTT TGCAGAGCGA CACCCTGTTG
GAAAACTGGC AGGGGGTGGT GTCCGGGGCG TTGTACTGGA GTGATGATCG ATTGCCCGAC
AGCGAGCGTG CGGGGTTTGG CGGGCAGCAT TTCGGGCGCG GTTACCCGCG CGATCAGGCG
GACGGTGACA AGGGCTGGGG TGTGGCTTAC GAGGTCAACT ACAGCGTGCG CAGTAGCTGG
CTTGCGCGGG TTCAGCCCTA TGCGGTGGTG GATACCGCTC AGGCCTGGCA TAACCGGGGA
CCGGTGGAGG ACGCCCATCT GGCTTCGGTG GCGCTGGGCG TGCGGTTAGG GGGTGGGCAT
ATGTTCAATG TGGCGCTGGA AGTGGCCAAG CCGTTGGCGG ATGTGGCGCT GGATAGCCTG
GACCGTCGGC CTCGGTTGTC GTTGAACCTG GCGATCCAGT TGTAG
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| Protein sequence | MRPLVVPLML LLWALAAHAD PLPGFLDSHE YERRLPSANL PMTDYSPVNP RIRLAGAAID
NPDWAPANTR LVLHKVRFEG GTVFPLGDLR EHYQPLIGRE TTLGELQQYT QRLTQRYRQE
GYLLSYAYLP PQDVAYGRVN VVLVEGYVRD YRVDGDIGPA SEYLQQLLAR IEAERPLTRE
TLERYLGLAT RMPGVVVEAE LAMARAADGV AQLTVHARRK PLSAAVSVAD SSRDAAQALI
TVASNAQTRH GERVTASWLL PPGNDRVYYQ RLDYSQYLDA AGSQLLLSAS RYRSEPATRI
RLDDGRDITR EQDSERYAIG LRQPVLVRPN EWLAVQGHVY SVSEHDEDRM AEQPPSRKYD
TYVRALSFEG DWRKVEQGRL RIVSAGVHQG LDYLGARSDA DYDLDFLRLR LSGLQSDTLL
ENWQGVVSGA LYWSDDRLPD SERAGFGGQH FGRGYPRDQA DGDKGWGVAY EVNYSVRSSW
LARVQPYAVV DTAQAWHNRG PVEDAHLASV ALGVRLGGGH MFNVALEVAK PLADVALDSL
DRRPRLSLNL AIQL
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