| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0609 |
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| Symbol | |
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| ID | 5191304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 682243 |
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| End bp | 687144 |
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| Gene Length | 4902 bp |
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| Protein Length | 1633 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585061 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001265961 |
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| Protein GI | 148545859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA AAGGATTGTT GCTGGCCTGC GCGCTGGCGT TGCTCAGTGC CTGTGACTCT
TCCACGTCGG GCAAACCGGC GCCGGTCGAG AAAACCGTGG CGCCCGCGCC CGCCGAAACC
CCCGCCCCCA AGCGTGAGGA CCCGGCCGTG CTCGCCAAGC GCTACGAGGG CCGCGAACTC
ACGGTGCTGG ACGTATCGGA AGTGCAGCTC GATGGCGCGG CAACGCTGTC GATCAGCTTC
TCAGCACCGC TGGATGCCAA GCAGGACTTC GCTACCAAGG TGCACCTGGT CGACACCGTC
AAGGGTAAGC TAGATGGCGC CTGGGAACTC TCCGACAACC AGATTGAGCT GCGCCTACGC
CACCTGGAGC CGCAGCGCAA GCTGGTGCTG ACCGTCGACA AGGGGCTGCT GGCAGTCAAC
GGCAAGCAGC TGGACAGCGA GTCGATCACC CGCCTGGAAA CCCGCGACAT GCAGCCGACC
ATCGGCTTTG CCAGCCGCGG CTCGCTGCTG CCTACCCGCC TGGCAGAAGG CCTGCCGGTG
ATTGCTCTGA ACGTCGACAA AGTGGATGTC GAGTTCTTCC GCGTCAAGCC AGACATGCTC
TCGACCTTCC TGGCCAACTG GGGACGCAAC AGCAGCCTGT ACTACTACCA GTCCAAGGAA
ACCCTGGACA TGGCCGAGCT GGTCTACAGC GGCCGCTTCG ATCTAAACCC GGCGCGCAAC
ACGCGCGAGA CCGTGTTGCT GCCGATTGCC GGCATCAAGC CGTTGCAGGC GCCAGGCGTG
TACCTGGCAG TGATGCGCGC CTCGGGTACC TACGATTATT CTCAGCCGGC AACCCTGTTC
ACCCTCAGCG ACATCGGCGT GTCGGCCCAC CGCTACCGCG ACCGCATTGA CGTGTTTGCT
CAAGCCCTGG AAGGCGGCAA GGCGCTGAGC GGCGTCAACC TGGAAATCCA TGACGAAAAG
GGCAAGCTGC TGGCCCAGGC CACCAGCGAT GGCAAGGGGC ATGCCCAGCT GCCGATCACG
CCCAAGGCCG ATACCCTGAT CGCCACCCAG GGCGTGCATA CCACGCTGCT GCGCCTGAAC
ACCGCAGCCC TGGACCTGGC CGAATTCGAC ATCACCGGGC CTCAGGCCAA CCCCCTGCAG
TTCTTCATCT TCGGCCCGCG TGACCTGTAC CGCCCGGGTG AGACGGTGCT GCTCAACGGC
CTGCTGCGCG ACCAGGACGG CAAGCCGGTC AAAGCCCAGC CGGTGAGCGT GGAAGTGCGT
CGCCCGGATG AACAGGTGAG CCGCAAGTTC GTCTGGGAAG CCGACAGCAA TGGCTTGTAC
CAATACCAGT TGCAACTGGC CACCGAGGCC CCGACCGGCC GTTGGCAACT GCTGCTCGAC
CTGGGTGGCG GGCGCAAGCA GGTCTATGAA TTCCTCGTTG AAGACTTCCT GCCCGAGCGC
CTGGCGCTGG AGCTCAAGGG CAGCAGCACA CCGCTTTCGC CGGATGAAGA TGCGCGTATC
CAGGTCAATG GCCGTTACCT CTATGGTGCG CCGGCCGCCG GCAACCGCCT GAGCGGTCAG
GCCTATGTAC GCCCGCTGCG CGAGGCAGTA CCGGCGTTGC CTGGCTACCA GTTCGGCTCG
GTCACCGAAA CCGATCTGAA CCAGGACCTG GAACTGGACG AAGTCACCCT TGACCAGGCC
GGCAAGGCGG TGGTCGATAT CGAAAGCCGT TGGGCCGAAG CCCGCTCTCC GCTGCAACTG
ACCGTGCAGG CCAGCCTGCA GGAGTCGGGT GGCCGGCCGA TCACCCGGCG CCTGGAGCAG
CCTATCTGGC CGGCTGAGCG CCTGCCGGGC CTGCGAGGCC TGTTCGAAGG TGAGGAGACC
GATAGCGACG GGCCCGTGGA ATTCGAATTC CTGGTGGCCG ACCGCGACGG TAACAAACTG
GCGGCCGACG CGCTTAAAGT GCGCCTTGTT CGCGAACGCC GCGATTACTA CTGGAATTAC
TCGCAAAGCG ACGGCTGGAG CTACGCCTAC AACGAGAAGT TCCTGACCCA GAACGAAGAG
ACGATCAGCG TCAAGGCAGG TTCCACCGCC AAACTCAGCT TCCAGGTTGA GTGGGGCCCG
TACCGCGTCG AGGTCGAAGA CCCGCAGACC GGTCTGGTGT CCAGTGAGCG CTTCTGGGCC
GGCTACCGTG CCCAGGACAA CGCTGAGGGC GGCGCGGTGC GGCCGGACCA GGTCAAGCTG
GCGCTGGACA AACCTTCCTA CACCGATGGC GCTACTGCCA AGGTCACCGT CACCCCGCCC
GCTGCGGGTA GCGGCTACCT GATGATCGAG TCCAGCGATG GCCCGCTGTG GTGGCAGGAG
ATCGATGTGC CCGCCGAGGG CAAGACCTTT GACGTGCAAC TGGACAAGGC CTGGGCCCGT
CACGACCTGT ACATCAGCGC GCTGGTTATC CGCCCTGGTG AGCGCAAGGC CAATGCCACG
CCCAAGCGCG CCGTGGGCGT GCTGCACCTG CCGCTGGACC GCGCCGAGCG CAAGCTTGCG
CTGAGCCTGC AGGCGCCGGA AAAAATGCGC CCGAAACAGC CTTTGACAGT GAAGGTAAAG
GCCGCCAACG CCGATGGCAG TGTGCCCAAG CAGGTGCATG TGTTGTTGTC GGCGGTGGAC
GTGGGCATCC TCAACATCAC CGATTTCAAA ACCCCCGACC CGTTCGCCAG CCTGTTCGGG
CGCAAGGCCT ATGGTGCCGA TCAACTGGAC ATCTACGGCC AGTTGATAGA GGCCGGCCAA
GGCCGCCTGG CCAGCCTGGC GTTCGGTGGT GACGCAGCGA TGGCCAAGGG GGGCAAGCGA
CCCAACACTA CGGTAACCAT CGTCGCCCAG CAGAGCCTGC CGGTGACGCT GGACGACAAG
GGTGAGGGCC AGGCCACGGT CGACATCCCC GACTTCAACG GTGAACTGCG GCTGATGGCG
CAGGCCTGGA CCGAAGAGCA CTTCGGCATG GCCGAAGGCA AGACCGTGGT CGCCGCGCCG
TTGATTGCCG AGCTTTCGGC CCCGCGCTTC CTGGCCGGTG GCGACCGTAC CAGCCTGGCA
CTGGACCTGG CCAACCTGTC CGGCCGCGCC CAGCAACTGA GCGTCGAAAT CACCACGGAT
GGGCAACTGA GCCTGGCGGC CAATGCCGTG CAGAGCGTTA ACCTGGCCGA AGGGCAGCGC
TCGACGCTGA TGATTCCGGT GCAGGCCCAG GGGGGGCTGG GGCAGGGCAA GGTGCATGTC
CGGGTGACGG GCCTGCAACT GCCGAACGAG CCGGTCAATG CGTTCGAGCG TGAGTGGACG
CTGGGCGTGC GCCCGGCCTA CCCGGCAATG CTCAAGCACT ACCGTCTGGC CTTGAAGGAC
CAGCCGTGGA CTCTGCCCGA AGCAGACCTG GCCGCCTTCG AACCCGCAGG CCTGGAAGCC
AGCCTGGCCT TGTCGAGCCG GCCGCCGCTG AACCTTGCCG AGCAGATTCG CGCGCTGCAA
GCCTACCCCT ACGGCTGCCT CGAACAGACC ACCAGCGGCC TGTACCCTTC GCTGTACGCC
GATGCCGACA GCCTCAAGCG CCTTGGCATC AAGGGCGAGC CGGCGGATGT GCGCAAACGC
AAGATCGAAA TGGGCATCGA GCACCTGCTG GGGATGCAGC GCTACAACGG CAGCTTTGGC
CTGTGGAGTT CGGACAGCGA AGAAGAGTAC TGGCTGACCG CCTATGTGAC TGACTTCCTG
CTGCGTGCCC GTGACCAAGG GTATGGCGTA CCCGCCGAGG CATTGAAGAA GGCCAGTGAG
CGCTTGCTGC GTTACCTGCA GGAACGCAAC CTGATCGAAG TGGACTACAG CGAAAATGCC
GACCACACGC GCTTTGCGGT GCAGGCCTAC GCGGCGCTGG TGCTGTCGCG CAGCCAGCAG
GCGCCGTTGG GTGCCCTGCG CGGGCTGTTC GAACGTCGCG CTGATGCCCG CTCCGGTCTG
CCGCTGGTAC AACTGGCAGT GGCGCTGGAC AAAATGGGCG ACAAACCGCG TGCCGAGCAA
GCCTTGCAGG CGGGCCTGGG CATCAGCCGT GGCAAAGGCT GGCTGGCCGA TTATGGCAGC
GCCCTGCGTG ACCAGGCACT GATCCTGGCG CTGCTGCAGG AAAGCAACCT GGCCAGCAGC
CAGGTCGATC AGCGCCTGTT CGCCTTGTCG GATGAACTGG CGGCCAACCG TTGGCTGTCG
ACCCAAGAGC GCAATGCACT GTTCCTCGCT GGCCGTGGCC TGCTGGGCAA GCCGGAAGGC
CAGTGGCAGG CACGCCTGGA CAGCGCGGGT GAAGTGCGCG AGTTGAACAA TGCCGAGGCC
GGTATGAAGC TGGAAGGCCC GTTACTGGCC TCGCCTCTGA GCGTGCAGAA TGAAGGCAAC
GAGACGCTGT ACCAGCAACT GACCTTGTCC GGCTACCCAC GACAGGCACC TGCTGCTGGC
GGCAACGGCC TGCAGATTCA CAGAGAGTAC CTGGGCATGA ATGGCCAGCC GCTGGACCTG
CACAACCTGC GCAGTGGCGA CCTTGTGCTG GTGCACCTGG CGCTCAAAGC TGAGGACCGC
GTGCCGGATG CGTTGGTGGT GGACCTGCTG CCGGCCGGCC TGGAGCTGGA AAACCAGAAC
CTGGCTCAAA GCGCCGCCAG CCTGGACAAC GCCAGCAGTG CAGTGAAGGC GTGGCGCGAG
TCGATGCAGA ATGCCAGCGT GGTGCATCAG GAGTACCGTG ATGACCGTTA TGTTGCCGCG
CTCAAGCTTG ACGGCTATGG CACCACCCAC CTGCTGTACC TGGCGCGAGC AGTGACCCCG
GGCACCTACC GCGTGCCGCC GCCGCAGGTC GAGTCGATGT ATCGGCCGAA CCTGCAGGCC
GTGGGCGATG GGCAAGGGGA GATGACGGTG AAGGCCCGCT AG
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| Protein sequence | MFNKGLLLAC ALALLSACDS STSGKPAPVE KTVAPAPAET PAPKREDPAV LAKRYEGREL
TVLDVSEVQL DGAATLSISF SAPLDAKQDF ATKVHLVDTV KGKLDGAWEL SDNQIELRLR
HLEPQRKLVL TVDKGLLAVN GKQLDSESIT RLETRDMQPT IGFASRGSLL PTRLAEGLPV
IALNVDKVDV EFFRVKPDML STFLANWGRN SSLYYYQSKE TLDMAELVYS GRFDLNPARN
TRETVLLPIA GIKPLQAPGV YLAVMRASGT YDYSQPATLF TLSDIGVSAH RYRDRIDVFA
QALEGGKALS GVNLEIHDEK GKLLAQATSD GKGHAQLPIT PKADTLIATQ GVHTTLLRLN
TAALDLAEFD ITGPQANPLQ FFIFGPRDLY RPGETVLLNG LLRDQDGKPV KAQPVSVEVR
RPDEQVSRKF VWEADSNGLY QYQLQLATEA PTGRWQLLLD LGGGRKQVYE FLVEDFLPER
LALELKGSST PLSPDEDARI QVNGRYLYGA PAAGNRLSGQ AYVRPLREAV PALPGYQFGS
VTETDLNQDL ELDEVTLDQA GKAVVDIESR WAEARSPLQL TVQASLQESG GRPITRRLEQ
PIWPAERLPG LRGLFEGEET DSDGPVEFEF LVADRDGNKL AADALKVRLV RERRDYYWNY
SQSDGWSYAY NEKFLTQNEE TISVKAGSTA KLSFQVEWGP YRVEVEDPQT GLVSSERFWA
GYRAQDNAEG GAVRPDQVKL ALDKPSYTDG ATAKVTVTPP AAGSGYLMIE SSDGPLWWQE
IDVPAEGKTF DVQLDKAWAR HDLYISALVI RPGERKANAT PKRAVGVLHL PLDRAERKLA
LSLQAPEKMR PKQPLTVKVK AANADGSVPK QVHVLLSAVD VGILNITDFK TPDPFASLFG
RKAYGADQLD IYGQLIEAGQ GRLASLAFGG DAAMAKGGKR PNTTVTIVAQ QSLPVTLDDK
GEGQATVDIP DFNGELRLMA QAWTEEHFGM AEGKTVVAAP LIAELSAPRF LAGGDRTSLA
LDLANLSGRA QQLSVEITTD GQLSLAANAV QSVNLAEGQR STLMIPVQAQ GGLGQGKVHV
RVTGLQLPNE PVNAFEREWT LGVRPAYPAM LKHYRLALKD QPWTLPEADL AAFEPAGLEA
SLALSSRPPL NLAEQIRALQ AYPYGCLEQT TSGLYPSLYA DADSLKRLGI KGEPADVRKR
KIEMGIEHLL GMQRYNGSFG LWSSDSEEEY WLTAYVTDFL LRARDQGYGV PAEALKKASE
RLLRYLQERN LIEVDYSENA DHTRFAVQAY AALVLSRSQQ APLGALRGLF ERRADARSGL
PLVQLAVALD KMGDKPRAEQ ALQAGLGISR GKGWLADYGS ALRDQALILA LLQESNLASS
QVDQRLFALS DELAANRWLS TQERNALFLA GRGLLGKPEG QWQARLDSAG EVRELNNAEA
GMKLEGPLLA SPLSVQNEGN ETLYQQLTLS GYPRQAPAAG GNGLQIHREY LGMNGQPLDL
HNLRSGDLVL VHLALKAEDR VPDALVVDLL PAGLELENQN LAQSAASLDN ASSAVKAWRE
SMQNASVVHQ EYRDDRYVAA LKLDGYGTTH LLYLARAVTP GTYRVPPPQV ESMYRPNLQA
VGDGQGEMTV KAR
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