| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0606 |
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| Symbol | |
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| ID | 5191772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 677919 |
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| End bp | 679832 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585058 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001265958 |
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| Protein GI | 148545856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAC GACGCACACG CAAAGACGAT GGTAGCCAAT GGACCGTGGC TGACAGCCGC
AGTGTTTATG GCATCCGCCA TTGGGGCGCT GGCTATTTCG CCATCAATGA AGCCGGGCGC
GTCGAAGTAC GCCCCAACGG CCCTCAAAGT GCTCCGATCG ACCTGTTCGA ACAGGTCGAC
GAACTGCGCC AGAGCGGCTT GTCGCTGCCC TTGCTGGTGC GCTTCCCTGA TATTCTGCAG
GACCGTGTGC GCCAGCTGAC CGGTGCCTTC GACGCCAACA TCGCGCGCCT GGAATACCAG
AGCCAATACA CCGCGCTGTA CCCGATCAAG GTCAACCAGC AGGAAGCGGT GGTGGAAAAC
ATCATCGCCA CGCAAAACGT TTCCATCGGC CTGGAAGCCG GCTCCAAACC TGAGTTGCTG
GCAGTGCTGG CGCTGGCGCC GAAGGGCGGC ACCATCGTCT GCAACGGCTA CAAGGACCGT
GAGTTCATTC GCCTGGCGCT GATGGGTCAG AAGCTTGGCC ACAATGTGTT CATCGTCATC
GAGAAAGAGT CGGAAGTGGC CCTGGTGATC GAAGAGGCCG CCGAGCTCAA GGTGAAACCA
CAGGTTGGCC TGCGCGTTCG CCTGTCGTCG CTGGCCTCGA GCAAGTGGGC CGACACCGGT
GGCGAGAAGT CCAAGTTTGG TTTGTCCGCC GCCCAGTTGC TTTCGGTGGT GCAGCGCTTC
CGCGATGCGG GCCTGGATCA GGGCATCCGC CTGCTGCACT TCCACATGGG TTCGCAGATC
GCCAACCTGG CTGACTACCA GCACGGTTTC AAGGAAGCCA TCCGTTATTA CGGCGAACTG
CGTGCGCTGG GCCTGCCGGT CGACCACATC GACGTGGGTG GCGGCCTGGG TGTGGACTAC
GACGGCACTC ACTCGCGCAA TGCCAGCTCG ATCAACTACG ACATGGACGA CTACGCCGGC
GTGGTGGTGG GCATGCTCAA GGAGTTCTGC GACGCACAGG GCCTGCCGCA CCCGCATATC
TTCTCGGAGA GTGGCCGTTC GCTGACCGCG CACCACGCCA TGCTGGTGAT CCAGGTGACC
GACGTCGAGA AACACAATGA CGACGTACCG ACCATCGATA ACAAGGAAGC CCTGCCCGAG
ACCGTGCAGT GGCTGGTCGA CCTGCTTGGC CCGACCGACA TCGAGATGGT CACCGAGACC
TACTGGCGCG CCACCCACTA CATGGGTGAT GTGGCCGCGC AGTACGCTGA TGGCAAGATC
AGCCTGGGCG AGAAAGCCTT GGCCGAGCAG TGCTATTTCG CCGTGTGCCG CCGTCTGCAC
AACTCGCTGA AAGCCCGCCA GCGCTCGCAC CGCCAGGTGC TGGACGAGCT GAACGACAAG
CTGGCCGACA AGTACATCTG CAACTTCTCG GTGTTCCAGA GCCTGCCAGA CACCTGGGCC
ATCGGCCAGG TCCTGCCGAT CATCCCGCTG CACCGCCTGG ACGAAGAGCC GATGCGGCGT
GCGGTATTGC AGGACCTGAC TTGCGATTCC GACGGCAAGA TCAACCAGTA CGTTGACGAG
CAGAGCATCG AAACCAGCAT GCCGGTGCAT GCGGTGAAGG AGGGCGAGGA TTACCTGCTG
GGCGTGTTCC TAGTGGGCGC CTACCAGGAA ATCCTGGGTG ACATGCACAA CCTGTTCGGT
GACACCGACT CGGTGAACAT CTACCAGAAT GCCGACGGCA GCGTGTACCA CGCGGGTATC
GAAACCCACG ACACCATCGA AGACATGCTG CGCTACGTGC ACCTGTCGCC GGAAGAGTTG
ATGACGCATT ACCGCGACAA GGTCGCCAGC GCCAAGATCA CTGCGCGTGA GCGGACCCAG
TATCTGGATG CCTTGCGCCT GGGCTTGACC CGGTCTTCGT ACCTGTCGTC GTAA
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| Protein sequence | MSVRRTRKDD GSQWTVADSR SVYGIRHWGA GYFAINEAGR VEVRPNGPQS APIDLFEQVD
ELRQSGLSLP LLVRFPDILQ DRVRQLTGAF DANIARLEYQ SQYTALYPIK VNQQEAVVEN
IIATQNVSIG LEAGSKPELL AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI
EKESEVALVI EEAAELKVKP QVGLRVRLSS LASSKWADTG GEKSKFGLSA AQLLSVVQRF
RDAGLDQGIR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RALGLPVDHI DVGGGLGVDY
DGTHSRNASS INYDMDDYAG VVVGMLKEFC DAQGLPHPHI FSESGRSLTA HHAMLVIQVT
DVEKHNDDVP TIDNKEALPE TVQWLVDLLG PTDIEMVTET YWRATHYMGD VAAQYADGKI
SLGEKALAEQ CYFAVCRRLH NSLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA
IGQVLPIIPL HRLDEEPMRR AVLQDLTCDS DGKINQYVDE QSIETSMPVH AVKEGEDYLL
GVFLVGAYQE ILGDMHNLFG DTDSVNIYQN ADGSVYHAGI ETHDTIEDML RYVHLSPEEL
MTHYRDKVAS AKITARERTQ YLDALRLGLT RSSYLSS
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