| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0600 |
|---|
| Symbol | dipZ |
|---|
| ID | 5194361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 669783 |
|---|
| End bp | 671555 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640585052 |
|---|
| Product | thiol:disulfide interchange protein precursor |
|---|
| Protein accession | YP_001265952 |
|---|
| Protein GI | 148545850 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCC TGTTTCTCAT GCTGTTCCTG CTGCTGGCCA GCCCTGCCTT CGCCACAGGC
CTGCTCGACA ACCGCCCAAG CGCCACCCTT GGCGCCGCTT CGCTGGCCAA CAACGCCGAC
TTTCTGCCGG TACACGAGGC CTTCAAGCTC AACCTGGTCC AGGCCGATGC GCAAACCATC
AAGCTGCGCT TCGTCGCCAC CGATGGCTAC TACCTCTACC GCCACCGCTT CCAGTTCCAC
ACGGAACCGG CCGACATCAC CCTGGGCACG CCGAACATCC CCAAAGGTGA GGCCAAGCAC
GATGAATTCT TCGGCGACGT CGAGGTGTAC CACGGCGTGC TCGATATCGA GTTGCCACGC
AAAGACCCAC GCGCCTTCAC CCTGCTGGTG GGCTACCAGG GTTGCGCCGA CAAGGGCCTG
TGCTACCCGC CGGAAACCGC ACGCCTGAGT ATCGATGGCG AGGGCGTTGC AAACACGCCA
GCCACCCGCG AACACGGCTG GAACTGGAAG TCGCTGCTGC TGTTCTTCCT CGCTGGGGTC
GGCCTGACCT TCACCCCCTG CGTCCTGCCA ATGTTACCGA TCCTTTCCGG TGTGGTGCTG
CGCGGCCAGG TTGGTGGCGT GCGCGGCCTG GCGCTGTCGC TGGCCTACGT GCTGCCAATG
GCCGCCAGCT TCGCGGTGCT CGGCGCACTG ATGGGCCTGT TCGGCGCAAG CCTGAACCTG
CAGGCGCGCC TGCAGTCGGC CTGGGTGCTG GTTCCCTTCG CGCTGTTTTT CGTGGTGTTC
GCCCTGGCCA TGTTCGGCCT CTTCGAACTG AGGCTGCCCC AGGCCCTGAG CAACCGCCTG
AACAACGTCG CCAACCACAC CCGCGGCGGC TCGCTGCTGG GTGCAGCAGT GCTCGGTGTA
CTCTCCAGCT TGCTGGTTTC TCCATGTGTC TCGGCCCCCC TGGCCGGTGC CTTGCTCTAT
ATCAGCGCCA GCGGCGATGC CCTGGGTGGC GCGCTCAAGC TGTTCACCCT GGGTTTGGGC
ATGGGTGCGC CACTGCTGCT GGTGGCCACC GGTGGCGCGG CCTGGCTGCC CAAAAGCGGC
CCATGGATGA ACACGGTGAA AAACGCCATT GGCGTACTGC TGCTGGGGCT GGCCATCGGT
TTGCTCAGCC GTGTACTGCC AGGCCCTGTG ACCTTGCTGC TGGTCGGTTT CCTCGCCGCG
GGTGTGGCAC TGTTCCTCGG CGCGCTGGAA TTCGTCGTCA AGACGGCGGC CCAGCGCCTG
GCGCAACTGC TCGGCCTGGC CTTGCTGGTG TACGCGCTGG CTTGCTGGTA CGGCGCACTC
ACTGGCCAGG GCGACCCACT GCGCCCACTG CCGGGGGCGT CACTGGCCGC CAGCGGCAGC
CTCCCGACGG CAAAAGCCGA TGCCTGGCAG ACCATCACCA CACCTGATGC TCTGGACGCA
GCCCTGGCGC AAGCCCAGGC CGCCGGCCAG CCAGTGCTGC TGGACTGGTA CGCCGACTGG
TGCATCAGCT GCAAGGTGAT CGAGCATGAG GTGCTCAATG CACCGCAAGT GCAAACACAG
CTGGCCGGCT TCAAACTGCT ACGTTTCGAC ATCACCGACA GTAATGCCGA GCAACGCACG
CTGCTCGACC GCTACCAGCT GTTCGGCCCC CCCGCCCTGC TGTTCTTTGC TGCGAACGGC
AGCGAAATTA CCGCTGATCG GGTGATTGGC GAGATAAATG CCGGTGAATT TGCGCAGATT
CTGACGCGCG TGCGCGGCAA AGTCGGTCTA TAA
|
|---|
| Protein sequence | MRRLFLMLFL LLASPAFATG LLDNRPSATL GAASLANNAD FLPVHEAFKL NLVQADAQTI
KLRFVATDGY YLYRHRFQFH TEPADITLGT PNIPKGEAKH DEFFGDVEVY HGVLDIELPR
KDPRAFTLLV GYQGCADKGL CYPPETARLS IDGEGVANTP ATREHGWNWK SLLLFFLAGV
GLTFTPCVLP MLPILSGVVL RGQVGGVRGL ALSLAYVLPM AASFAVLGAL MGLFGASLNL
QARLQSAWVL VPFALFFVVF ALAMFGLFEL RLPQALSNRL NNVANHTRGG SLLGAAVLGV
LSSLLVSPCV SAPLAGALLY ISASGDALGG ALKLFTLGLG MGAPLLLVAT GGAAWLPKSG
PWMNTVKNAI GVLLLGLAIG LLSRVLPGPV TLLLVGFLAA GVALFLGALE FVVKTAAQRL
AQLLGLALLV YALACWYGAL TGQGDPLRPL PGASLAASGS LPTAKADAWQ TITTPDALDA
ALAQAQAAGQ PVLLDWYADW CISCKVIEHE VLNAPQVQTQ LAGFKLLRFD ITDSNAEQRT
LLDRYQLFGP PALLFFAANG SEITADRVIG EINAGEFAQI LTRVRGKVGL
|
|---|
| |