| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0585 |
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| Symbol | |
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| ID | 5195492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 652484 |
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| End bp | 654499 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640585037 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001265937 |
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| Protein GI | 148545835 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCA ATCACTTCAC GCGCCATGCC CGGCAGGTGC ATAGCGTTGC CCATGGTGGG
GCCGGGGAGG GCGGCAGTGA CCCGTCCATC GCCCGCTCCT GGCTGCGCTG CCTGGAGGAT
TACCACCTCG ACCCGGCGGT GATCGAAGCG CCGGTGGTGC TTGAGCATGG GCGCCTGCTG
GAAAGCCGCG AGCGCCTGCA TCAGGTGCTG CAAATTGCCG ACCATGAAAT GAACAGCCTG
CACCAGCAGC TTTCCGGCGC AGGCCACGCG GTGCTGCTGA CCGACGCCCG TGGGGTGATC
CTCAATTGCG TCAGTGCCCC CGCCGAGCGG CGCAGCTTCG AGCGTGCCGG GCTGTGGTTG
GGCGCTGACT GGAGCGAGGC GCGCGAGGGC ACCAATGGCA TCGGCACCTG CCTGGTCGAG
CGCCAGGCGC TGACCATCCA TCAGAACGAG CACTTCCGTG GCCGTCACAC CGGGCTGACC
TGCTCGGCCA GCCCGGTGTT CGACCCGCAT GGCGACCTGC TGGCGGTACT CGACGTGTCC
TCTGCGCGCC CCGACGTATC GCGGCAAAGC CAGTTCCACA CCATGGCGTT GGTCAACCTG
TCGGCAAAGA TGATCGAAAG CTGCTATTTC CTGCGCCATT TCGAGCAGCA ATGGTTATTG
CGTTTTCACC TGCAAGCCGA GTCGGTCGGC CTGTTCAGCG AAGGCTTGCT GGCGTTCGAC
GGCGATGGGC GCATTTGCGC TGCCAACCAA AGCGCACTGA ACCTGCTGGG CACGGTACGG
GGCGGCGTGC TGGGCAAACC GTTGACGTGC TTTTTCGCGT GCAGCCATGA CGAAATGTTC
AGCCGTGCCA CGCCCGGCGG CAGTACTGCC TGGCCGCTGC GCACCCTGGA CGGTCGCCAG
GTGTTCGCCA GCCTGCGGGG GCAGGCCCGG GCGCCGGTGT GGTCGGTGCC GGCCGCCCAG
CCGCGGCCCG CAGGTGAAGT GGAGCCGCTG GTCTGTCTGC TGGACCCTGC GTTGCAAAAT
GATTTCCGCC GCAGCGTGCG GGTGTTCGAG CGCGATGTGC CATTGCTGCT GCGCGGCGAG
ACCGGCTGTG GCAAGGAGGC CTTCGCCCAG GCTGTGCATC AGGCCAGTGA GCGGCGCGGC
AAGCCGTTCG TCGCCATCAA CTGCGCTTCT ATTCCGGAAA GCCTGATCGA GAGTGAGCTG
TTCGGGTACC GCGGCGGCAG TTTTACCGGC GCGCGCAAGG AGGGCATGCG CGGCAAGCTG
TTGCAGGCCG ACGGCGGCAC CTTGCTACTG GACGAGATCG GCGATATGCC GCTTGCCCTG
CAAACCCGAC TGCTGCGGGT ACTGGAGGAG CGCCAGGTGG TGCCGATCGG GGGAGAGCCA
CAGGCGGTGG ACGTGCGCAT CGTCAGCGCT ACGCACCGTG ACCTGCTGGA ACGGGTTGAA
CAGGGCAGTT TCCGCGAGGA CCTGTATTAC CGCCTCAATG GCCTGGAGGT AGCGCTGCCG
GCGGTGCGCG AACGCAGTGA CAAGGCGCAG TTGCTGGACT TTCTGCTACG CCAGGAGACG
CAGGGGCAAC GCATAGACAT CGAGCCCAGG GCGCGGCAGG CGCTGCTCGC ATTTAACTGG
CCGGGGAACG TGCGGCAGAT GCGCAATGTG CTGCGTACCC TGGTGGCGCT TTGCGAAGAT
GCCCGCATCA CCTTTACGGA CCTCCCCGCA GTCATCCGCA CCAGCCCACC TCCCGTGGGG
GCGGGCGAGC CCGCGAAGAT ATCCGACCAG GCAATAGAGG GCGAGGGCGT TGCCCTCGTT
CGCGGGCAAG CCCGCTCCCA CAGGTCCGGC GGTGCCGCAG AGATCGAGGG TGAATCTGTA
GGGACCGAGG TTCTGCTCGA CGCGGAGCGG CAAGCGCTGA AGGAGGTCCT GGAGGCAAAA
CACTGGCATC TCACCCGCGT TGCCGAGCAC TTGGGCATCA GCCGCAATAC CTTGTATCGA
AAACTGCGCA AACACGGCAT TACCAGGGGC GACTGA
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| Protein sequence | MQSNHFTRHA RQVHSVAHGG AGEGGSDPSI ARSWLRCLED YHLDPAVIEA PVVLEHGRLL
ESRERLHQVL QIADHEMNSL HQQLSGAGHA VLLTDARGVI LNCVSAPAER RSFERAGLWL
GADWSEAREG TNGIGTCLVE RQALTIHQNE HFRGRHTGLT CSASPVFDPH GDLLAVLDVS
SARPDVSRQS QFHTMALVNL SAKMIESCYF LRHFEQQWLL RFHLQAESVG LFSEGLLAFD
GDGRICAANQ SALNLLGTVR GGVLGKPLTC FFACSHDEMF SRATPGGSTA WPLRTLDGRQ
VFASLRGQAR APVWSVPAAQ PRPAGEVEPL VCLLDPALQN DFRRSVRVFE RDVPLLLRGE
TGCGKEAFAQ AVHQASERRG KPFVAINCAS IPESLIESEL FGYRGGSFTG ARKEGMRGKL
LQADGGTLLL DEIGDMPLAL QTRLLRVLEE RQVVPIGGEP QAVDVRIVSA THRDLLERVE
QGSFREDLYY RLNGLEVALP AVRERSDKAQ LLDFLLRQET QGQRIDIEPR ARQALLAFNW
PGNVRQMRNV LRTLVALCED ARITFTDLPA VIRTSPPPVG AGEPAKISDQ AIEGEGVALV
RGQARSHRSG GAAEIEGESV GTEVLLDAER QALKEVLEAK HWHLTRVAEH LGISRNTLYR
KLRKHGITRG D
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