| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0579 |
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| Symbol | |
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| ID | 5193987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 645334 |
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| End bp | 645981 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585031 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001265931 |
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| Protein GI | 148545829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.6837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.582888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCA ACCCGCTGGA CCTTATCCTG CATCTCGATG CCTACCTCGA TCTGCTGGTC
ACCAATTACG GTCCCTGGAT CTACGCCATC CTGTTCACCG TGATCTTCTG CGAAACCGGC
CTGGTAGTGA TGCCATTCCT GCCAGGCGAC TCGCTGCTGT TCATCGCCGG CGCCGTGGCG
GCGGGTGGCG GCATGGACCC GGTGCTGCTG GCCGGCCTGC TGATGGCCGC TGCAATCCTG
GGCGACAGTA CCAATTACGT GATCGGCCGA ACAGCCGGCG AGCGTTTGTT CAACAACCCC
AACTCCAAGA TCTTCCGCCG CGACTACCTG CAGCGTACCC ACGATTTCTA TGAACGCCAT
GGCGGCAAGA CCGTGACCAT GGCGCGCTTC CTGCCCATCT TGCGCACCTT CGCACCGTTC
GTCGCGGGCA TCGCTCACAT GCACTATCCA CGCTTCCTCG GCTTCAGCGT TGCCGGTTCG
CTGCTTTGGG TCGGCGGCCT GGTCACCTTG GGCTACTTCT TCGGCAACGT GCCGTTCATC
AAGCAGCACC TGTCGCTGAT GGTGGTGGGC ATCATCATCC TGTCGCTGGT GCCGATGATT
CTCGGCTTGC TGCGTGGGCG CCTGGGCCGT ACGGCCAAGG CTCACTGA
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| Protein sequence | MDFNPLDLIL HLDAYLDLLV TNYGPWIYAI LFTVIFCETG LVVMPFLPGD SLLFIAGAVA
AGGGMDPVLL AGLLMAAAIL GDSTNYVIGR TAGERLFNNP NSKIFRRDYL QRTHDFYERH
GGKTVTMARF LPILRTFAPF VAGIAHMHYP RFLGFSVAGS LLWVGGLVTL GYFFGNVPFI
KQHLSLMVVG IIILSLVPMI LGLLRGRLGR TAKAH
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